RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZNF488Q96MN9 340 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 CRIM1Q9NZV1 1036 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 OR5B21A6NL26 309 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 RBMXL2O75526 392 aaKnown RBP8.95□□□□□ -0.98
NPAS3-205ENST00000547068 CD1BP29016 333 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 NTF4P34130 210 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF816Q0VGE8 651 aaPredicted RBP8.95□□□□□ -0.98
NPAS3-205ENST00000547068 SPINK9Q5DT21 86 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 LCN12Q6JVE5 192 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 VASH2Q86V25 355 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 TSKUQ8WUA8 353 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 C1QTNF5Q9BXJ0 243 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 CSTL1Q9H114 145 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 DLL3Q9NYJ7 618 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 CHCHD2Q9Y6H1 151 aaPredicted RBP8.95□□□□□ -0.98
NPAS3-205ENST00000547068 V9GYV3 84 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 ESPL1Q14674 2120 aa8.95□□□□□ -0.98
NPAS3-205ENST00000547068 A0A0J9YW62 118 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 CXorf1O96002 111 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 CCNOP22674 350 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 GABRA2P47869 451 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 CEACAM16Q2WEN9 425 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 TMEM136Q6ZRR5 245 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 LINC00596Q86U02 117 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 FAM58AQ8N1B3 248 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 MUC15Q8N387 334 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 OR4F17Q8NGA8 305 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 CLEC7AQ9BXN2 247 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 SRXN1Q9BYN0 137 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 DEFB126Q9BYW3 111 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 WDR83OSQ9Y284 106 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
NPAS3-205ENST00000547068 TRAV9-2A0A087WT02 112 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 C3orf80F5H4A9 247 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 STAG3L2P0CL84 134 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 STAG3L3P0CL85 134 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 SPINK2P20155 84 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 SLC35B1P78383 322 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 CX3CL1P78423 397 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 RHOGP84095 191 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 VHLLQ6RSH7 139 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 EAF1Q96JC9 268 aaPredicted RBP8.94□□□□□ -0.98
NPAS3-205ENST00000547068 PRDM14Q9GZV8 571 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 C19orf25Q9UFG5 118 aaPredicted RBP8.94□□□□□ -0.98
NPAS3-205ENST00000547068 TRAPPC2LQ9UL33 140 aa8.94□□□□□ -0.98
NPAS3-205ENST00000547068 FAM186AA6NE01 2351 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 IGLV3-12A0A075B6K2 115 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 C9JCJ5 164 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 RRHO14718 337 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 ZNHIT1O43257 154 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 TMEM11P17152 192 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 SRD5A2P31213 254 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 COX19Q49B96 90 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 DHRS13Q6UX07 377 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 AAED1Q7RTV5 226 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF439Q8NDP4 499 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 SLC24A4Q8NFF2 622 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 OR2D2Q9H210 308 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 RARRES3Q9UL19 164 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 PTPRZ1P23471 2315 aaPredicted RBP8.93□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF891A8MT65 544 aaPredicted RBP8.93□□□□□ -0.98
NPAS3-205ENST00000547068 BMPR1BO00238 502 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 MT-CO3P00414 261 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 FTH1P19P0C7X4 201 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 PSG1P11464 419 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 IGLL1P15814 213 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 RPS20P60866 119 aaKnown RBP8.93□□□□□ -0.98
NPAS3-205ENST00000547068 RHOBP62745 196 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF718Q3SXZ3 478 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 LRRC10Q5BKY1 277 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 MRPL21Q7Z2W9 205 aaKnown RBP8.93□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF596Q8TC21 504 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 SF3B5Q9BWJ5 86 aaKnown RBP8.93□□□□□ -0.98
NPAS3-205ENST00000547068 DEPPQ9NTK1 212 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 LY96Q9Y6Y9 160 aa8.93□□□□□ -0.98
NPAS3-205ENST00000547068 SPAARA0A1B0GVQ0 90 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 ZIC3O60481 467 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 DKK1O94907 266 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 P0C879 139 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 PDLIM3Q53GG5 364 aaPredicted RBP8.92□□□□□ -0.98
NPAS3-205ENST00000547068 Q56UQ5 140 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 OR4A47Q6IF82 309 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 OR4P4Q8NGL7 312 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 MRPL27Q9P0M9 148 aaKnown RBP8.92□□□□□ -0.98
NPAS3-205ENST00000547068 KIAA1549Q9HCM3 1950 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 TRGV10A0A0A0MS01 117 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 TM4SF5O14894 197 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 HLA-DQA1P01909 254 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 TCL1AP56279 114 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 DSCR4P56555 118 aaPredicted RBP8.92□□□□□ -0.98
NPAS3-205ENST00000547068 RELBQ01201 579 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 IL11RAQ14626 422 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 COLCA1Q6ZS62 124 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 MOB1BQ7L9L4 216 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 H2BFWTQ7Z2G1 175 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 OCIAD1Q9NX40 245 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 GTF3C1Q12789 2109 aa8.92□□□□□ -0.98
NPAS3-205ENST00000547068 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 G3V3Y1 287 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 AMY1AP04745 511 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms