RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ALX4Q9H161 411 aaPredicted RBP12.29□□□□□ -0.44
DDX54-204ENST00000546898 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
DDX54-204ENST00000546898 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
DDX54-204ENST00000546898 EXTL2Q9UBQ6 330 aa12.29□□□□□ -0.44
DDX54-204ENST00000546898 IGHV4OR15-8A0A075B7B6 117 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 A0A087WW49 117 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 RAMP3O60896 148 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
DDX54-204ENST00000546898 NQO2P16083 231 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 INSL3P51460 131 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 SPCS2Q15005 226 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 POU2AF1Q16633 256 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 CMTM1Q8IZ96 169 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 ADAD2Q8NCV1 583 aaKnown RBP12.28□□□□□ -0.44
DDX54-204ENST00000546898 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
DDX54-204ENST00000546898 GPR31O00270 319 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 OVOL1O14753 267 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 NOL3O60936 208 aaKnown RBP12.27□□□□□ -0.45
DDX54-204ENST00000546898 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
DDX54-204ENST00000546898 TSPAN5P62079 268 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 DGCR2P98153 550 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 VAX1Q5SQQ9 334 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 LPCAT3Q6P1A2 487 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 SSX9Q7RTT3 188 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 SLC25A42Q86VD7 318 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 OR51H1Q8NH63 302 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 PLEKHA2Q9HB19 425 aa12.27□□□□□ -0.45
DDX54-204ENST00000546898 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
DDX54-204ENST00000546898 K7EIL1 84 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 RGS5O15539 181 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 RLN1P04808 185 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 FGF2P09038 288 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 APELAP0DMC3 54 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 TBPP20226 339 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 S100GP29377 79 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 SLURP1P55000 103 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
DDX54-204ENST00000546898 DCTN2Q13561 401 aaKnown RBP12.26□□□□□ -0.45
DDX54-204ENST00000546898 OR4A47Q6IF82 309 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 TTC9CQ8N5M4 171 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 DCUN1D4Q92564 292 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 MIXL1Q9H2W2 232 aa12.26□□□□□ -0.45
DDX54-204ENST00000546898 RANGRFQ9HD47 186 aaPredicted RBP12.26□□□□□ -0.45
DDX54-204ENST00000546898 SORL1Q92673 2214 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
DDX54-204ENST00000546898 ZNF735P0CB33 412 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 ZP3P21754 424 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 F2RP25116 425 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 UCP3P55916 312 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 MRPS10P82664 201 aaKnown RBP12.25□□□□□ -0.45
DDX54-204ENST00000546898 ZNF429Q86V71 674 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 LAX1Q8IWV1 398 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 DYNC2LI1Q8TCX1 351 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 DLX4Q92988 240 aaPredicted RBP12.25□□□□□ -0.45
DDX54-204ENST00000546898 RABL2AQ9UBK7 228 aaPredicted RBP12.25□□□□□ -0.45
DDX54-204ENST00000546898 MTFP1Q9UDX5 166 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 RABL2BQ9UNT1 228 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 ZNF257Q9Y2Q1 563 aa12.25□□□□□ -0.45
DDX54-204ENST00000546898 TRBV9A0A0B4J1U6 114 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 WI2-2373I1.2A0A1W2PRP0 233 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 NPIPB5A8MRT5 1133 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 S1PR2O95136 353 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 HLA-GP17693 338 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 SSBP1Q04837 148 aaKnown RBP12.24□□□□□ -0.45
DDX54-204ENST00000546898 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
DDX54-204ENST00000546898 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
DDX54-204ENST00000546898 ZNF343Q6P1L6 599 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 SLC38A6Q8IZM9 456 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 OR52I2Q8NH67 350 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 DGCR14Q96DF8 476 aaKnown RBP12.24□□□□□ -0.45
DDX54-204ENST00000546898 ABHD1Q96SE0 405 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 RSRP1Q9BUV0 290 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 HRASLSQ9HDD0 168 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 FAM212BQ9NTI7 297 aaPredicted RBP12.24□□□□□ -0.45
DDX54-204ENST00000546898 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 KLK11Q9UBX7 282 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
DDX54-204ENST00000546898 DPPA5A6NC42 116 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 MARCH11A6NNE9 402 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 GABARAPH6UMI1 98 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 UPK2O00526 184 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 CTDSP2O14595 271 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 IFNA6P05013 189 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 IL6RP08887 468 aaPredicted RBP12.23□□□□□ -0.45
DDX54-204ENST00000546898 ERVK-16P61578 105 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 ZNF45Q02386 682 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 CADM3Q8N126 398 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 FCAMRQ8WWV6 532 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 ISOC1Q96CN7 298 aa12.23□□□□□ -0.45
DDX54-204ENST00000546898 FYTTD1Q96QD9 318 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms