RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SIT1Q9Y3P8 196 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 PATJQ8NI35 1801 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 TNFSF15O95150 251 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 IL9P15248 144 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 NRN1LQ496H8 165 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 CACNG8Q8WXS5 425 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 WNT16Q9UBV4 365 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 CFPP27918 469 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 TSPAN7P41732 249 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 RPL8P62917 257 aaKnown RBP10.93□□□□□ -0.66
PTCH1-212ENST00000546744 PSG9Q00887 426 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 MRPL13Q9BYD1 178 aaKnown RBP10.93□□□□□ -0.66
PTCH1-212ENST00000546744 TMEM140Q9NV12 185 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 TYMSP04818 313 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 RPL27AP46776 148 aaKnown RBP10.93□□□□□ -0.66
PTCH1-212ENST00000546744 FXYD3Q14802 87 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-212ENST00000546744 OR4D5Q8NGN0 318 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF502Q8TBZ5 544 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 LOXL2Q9Y4K0 774 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 GREM1O60565 184 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 TBX6O95947 436 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 CD40P25942 277 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 PLPPR2Q96GM1 343 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 A0A1W2PRE2 83 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 C7orf71A4D174 169 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 OR2H2O95918 312 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 CXCL1P09341 107 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 TMEM108Q6UXF1 575 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 RBPMS2Q6ZRY4 209 aaKnown RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 DRAM1Q8N682 238 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 CLEC1BQ9P126 229 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 SNRPCP09234 159 aaKnown RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 CCL1P22362 96 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 P2RY6Q15077 328 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF714Q96N38 554 aa10.92□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF385AQ96PM9 386 aaKnown RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 MRPL27Q9P0M9 148 aaKnown RBP10.92□□□□□ -0.66
PTCH1-212ENST00000546744 ADMP35318 185 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 MPV17P39210 176 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 NXPH1P58417 271 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 TEX29Q8N6K0 151 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 TNFRSF19Q9NS68 423 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 CYSLTR1Q9Y271 337 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 TANC1Q9C0D5 1861 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 ANKRD36A6QL64 1941 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 C9JCJ5 164 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 GZMBP10144 247 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 ACTL10Q5JWF8 245 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 FAM222BQ8WU58 562 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 DIRC2Q96SL1 478 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 PTPRDP23468 1912 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 A0A1W2PQM1 296 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 MMP23AO75900 390 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 CA1P00915 261 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-212ENST00000546744 IL6RP08887 468 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-212ENST00000546744 PRDX2P32119 198 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 EGR4Q05215 589 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 TEX38Q6PEX7 206 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF664Q8N3J9 261 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF488Q96MN9 340 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 SPSB2Q99619 263 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 AICDAQ9GZX7 198 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 MYOFQ9NZM1 2061 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 LOC389332A0A1B0GUA5 103 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 LGALS7P47929 136 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 RTP5Q14D33 572 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 RTN4RQ9BZR6 473 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 RAB1BQ9H0U4 201 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 ELOVL5Q9NYP7 299 aa10.91□□□□□ -0.66
PTCH1-212ENST00000546744 TRIOBPQ9H2D6 2365 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 ODAMA1E959 279 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 FAM90A9PA6NNJ1 464 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 GDF9O60383 454 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 EMP1P54849 157 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 SRSF12Q8WXF0 261 aaKnown RBP10.9□□□□□ -0.66
PTCH1-212ENST00000546744 FMC1Q96HJ9 113 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 PHF7Q9BWX1 381 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-212ENST00000546744 RPP21Q9H633 154 aaKnown RBP10.9□□□□□ -0.66
PTCH1-212ENST00000546744 H3BUT2 72 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 IFNL4K9M1U5 179 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 CIRBPQ14011 172 aaKnown RBP10.9□□□□□ -0.66
PTCH1-212ENST00000546744 WNT5BQ9H1J7 359 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 MRPL16Q9NX20 251 aaKnown RBP10.9□□□□□ -0.66
PTCH1-212ENST00000546744 NLRC5Q86WI3 1866 aa10.9□□□□□ -0.66
PTCH1-212ENST00000546744 FTH1P19P0C7X4 201 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 CTSSP25774 331 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 MST1P26927 711 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 CCL7P80098 99 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms