RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ALX4Q9H161 411 aaPredicted RBP11.79□□□□□ -0.52
SSH1-204ENST00000546697 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
SSH1-204ENST00000546697 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
SSH1-204ENST00000546697 A0A1B0GW64 132 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 MEIS3P1A6NDR6 274 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 RBMXL2O75526 392 aaKnown RBP11.78□□□□□ -0.52
SSH1-204ENST00000546697 HRH1P35367 487 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 TMBIM6P55061 237 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 FAM209BQ5JX69 171 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 SLC25A42Q86VD7 318 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 OR5H2Q8NGV7 314 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 RAB2BQ8WUD1 216 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 C15orf40Q8WUR7 153 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 OR5B12Q96R08 314 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
SSH1-204ENST00000546697 ZNF2Q9BSG1 426 aaPredicted RBP11.78□□□□□ -0.52
SSH1-204ENST00000546697 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 ZNF257Q9Y2Q1 563 aa11.78□□□□□ -0.52
SSH1-204ENST00000546697 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
SSH1-204ENST00000546697 E7EUB6 86 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 PGLYRP1O75594 196 aaPredicted RBP11.77□□□□□ -0.53
SSH1-204ENST00000546697 NQO2P16083 231 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 TBPP20226 339 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 ZP3P21754 424 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 RAB25P57735 213 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 HERV-K104P61576 105 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 ZNF45Q02386 682 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
SSH1-204ENST00000546697 OR2B11Q5JQS5 317 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 VKORC1L1Q8N0U8 176 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 GPHA2Q96T91 129 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 DCUN1D5Q9BTE7 237 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
SSH1-204ENST00000546697 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 ACTL6BO94805 426 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 PMP2P02689 132 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 F2RP25116 425 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
SSH1-204ENST00000546697 SLURP1P55000 103 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 FXYD4P59646 89 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
SSH1-204ENST00000546697 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
SSH1-204ENST00000546697 SPCS2Q15005 226 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 AADACL3Q5VUY0 350 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 LPCAT3Q6P1A2 487 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 LHFPL1Q86WI0 220 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 TMEM17Q86X19 198 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 NECAP1Q8NC96 275 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 DYNC2LI1Q8TCX1 351 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 MIXL1Q9H2W2 232 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 MTFP1Q9UDX5 166 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
SSH1-204ENST00000546697 GPR31O00270 319 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 TNFSF12O43508 249 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 IGHV3-11P01762 117 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 CTRB1P17538 263 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 HLA-GP17693 338 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 RPL5P46777 297 aaKnown RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 THOC7Q6I9Y2 204 aaKnown RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 CMTM1Q8IZ96 169 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 ARRDC1Q8N5I2 433 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 ABHD1Q96SE0 405 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 B9D2Q9BPU9 175 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 CCDC59Q9P031 241 aaKnown RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
SSH1-204ENST00000546697 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
SSH1-204ENST00000546697 UPK2O00526 184 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 CD74P04233 296 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 FCER2P06734 321 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 HLA-DMAP28067 261 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 OR2B8PP59922 312 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 MRPS10P82664 201 aaKnown RBP11.74□□□□□ -0.53
SSH1-204ENST00000546697 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 SNX29P2Q8IUI4 249 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 DGCR14Q96DF8 476 aaKnown RBP11.74□□□□□ -0.53
SSH1-204ENST00000546697 FYTTD1Q96QD9 318 aaKnown RBP11.74□□□□□ -0.53
SSH1-204ENST00000546697 PHB2Q99623 299 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 AKIP1Q9NQ31 210 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 COA4Q9NYJ1 87 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
SSH1-204ENST00000546697 SORL1Q92673 2214 aa11.74□□□□□ -0.53
SSH1-204ENST00000546697 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
SSH1-204ENST00000546697 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms