RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SOCS1O15524 211 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 HBZP02008 142 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 TRGV3P03979 118 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 PPP1R1AQ13522 171 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF345Q14585 488 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 SP5Q6BEB4 398 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-218ENST00000545889 PRSS22Q9GZN4 317 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 ZIC3O60481 467 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 Q1RN00 199 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 GAPTQ8N292 157 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 C9orf106Q8NAJ2 232 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF485Q8NCK3 441 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 SSMEM1Q8WWF3 244 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 NCOR1P1Q9H4R4 102 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 TECRQ9NZ01 308 aaKnown RBP7.33□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM56-RWDD3S4R434 201 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 TRAV14DV4A0A0A6YYC5 116 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 A0A0G2JLM5 398 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 BMPR1BO00238 502 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 RPL8P62917 257 aaKnown RBP7.33□□□□□ -1.24
CLIP1-218ENST00000545889 DLK1P80370 383 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 SMAGPQ0VAQ4 97 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM78Q5T7P6 136 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 FAM166AQ6J272 317 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 ADAD2Q8NCV1 583 aaKnown RBP7.33□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 OR5C1Q8NGR4 320 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 IDI2-AS1Q9NZ38 188 aa7.33□□□□□ -1.24
CLIP1-218ENST00000545889 IGHV3-35A0A0C4DH35 117 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 NEURL1O76050 574 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 TDGF1P3P51864 188 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 TBC1D26Q86UD7 250 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 HIST3H2BBQ8N257 126 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 ABHD14BQ96IU4 210 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 PRR13Q9NZ81 148 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 WSB1Q9Y6I7 421 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 H3BQ15 152 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 SRD5A1P18405 259 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
CLIP1-218ENST00000545889 MFAP4P55083 255 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 EFNB1P98172 346 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF880Q6PDB4 577 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 ERASQ7Z444 233 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 MRGPRFQ96AM1 343 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF430Q9H8G1 570 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-218ENST00000545889 YTHDF2Q9Y5A9 579 aaKnown RBP7.32□□□□□ -1.24
CLIP1-218ENST00000545889 A0A0U1RQV5 110 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 OR4C45A6NMZ5 311 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 C1QTNF9BB2RNN3 333 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 C10orf142B7Z368 130 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 CORTO00230 105 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 OR2H2O95918 312 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 MGPP08493 103 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 SUCLG1P53597 346 aaKnown RBP7.32□□□□□ -1.24
CLIP1-218ENST00000545889 UCP3P55916 312 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 ZDHHC22Q8N966 263 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 MTFP1Q9UDX5 166 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 RNF222A6NCQ9 220 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 CTAG2O75638 210 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 C1QL1O75973 258 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 CD74P04233 296 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 G6PCP35575 357 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 SNRPD3P62318 126 aaKnown RBP7.32□□□□□ -1.24
CLIP1-218ENST00000545889 RFLNBQ8N5W9 214 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 GVQW1Q8N7I0 195 aa7.32□□□□□ -1.24
CLIP1-218ENST00000545889 RPL36A-HNRNPH2H7BZ11 118 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 HSBP1O75506 76 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 RBM11P57052 281 aaKnown RBP7.31□□□□□ -1.24
CLIP1-218ENST00000545889 FXYD3Q14802 87 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 C16orf82Q7Z2V1 217 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 OR2C3Q8N628 320 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 RNASE8Q8TDE3 154 aaKnown RBP7.31□□□□□ -1.24
CLIP1-218ENST00000545889 FAM103A1Q9BTL3 118 aaKnown RBP7.31□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM167BQ9NRX6 74 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 FAM24AA6NFZ4 105 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 CTDSPLO15194 276 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 HYPMO75409 117 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 HPRT1P00492 218 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 ASB13Q8WXK3 278 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM186Q96B77 213 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 FRRS1LQ9P0K9 344 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 A0A1B0GU03 582 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 C17orf100A8MU93 164 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 J3QW42 95 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 USF1P22415 310 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-218ENST00000545889 NPPCP23582 126 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 TSPOP30536 169 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 RAB9AP51151 201 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 SCAND1P57086 179 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 FGF12P61328 243 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 SPANXN1Q5VSR9 72 aa7.31□□□□□ -1.24
CLIP1-218ENST00000545889 Q6ZN92 141 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms