RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SECTM1Q8WVN6 248 aa16.07■□□□□ 0.16
SCARB1-210ENST00000545493 OR2A7Q96R45 310 aa16.07■□□□□ 0.16
SCARB1-210ENST00000545493 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.06■□□□□ 0.16
SCARB1-210ENST00000545493 OR2J3O76001 311 aa16.06■□□□□ 0.16
SCARB1-210ENST00000545493 IL6RP08887 468 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-210ENST00000545493 RPL27AP46776 148 aaKnown RBP16.06■□□□□ 0.16
SCARB1-210ENST00000545493 C19orf73Q9NVV2 129 aa16.06■□□□□ 0.16
SCARB1-210ENST00000545493 SIGLEC8Q9NYZ4 499 aa16.06■□□□□ 0.16
SCARB1-210ENST00000545493 ZNF257Q9Y2Q1 563 aa16.06■□□□□ 0.16
SCARB1-210ENST00000545493 A8MZ25 164 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 ZNF735P0CB33 412 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 MYOD1P15172 320 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 ATP5G2Q06055 141 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 SSX9Q7RTT3 188 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 SGPP2Q8IWX5 399 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 NECAP1Q8NC96 275 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 TM2D3Q9BRN9 247 aa16.05■□□□□ 0.16
SCARB1-210ENST00000545493 DNAH1Q9P2D7 4330 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 IZUMO1RA6ND01 250 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 MEIS3P1A6NDR6 274 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 NPIPB5A8MRT5 1133 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 KIR2DS2P43631 304 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 C15orf32Q32M92 178 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 TIMM50Q3ZCQ8 353 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 ADAMTSL5Q6ZMM2 481 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 FYTTD1Q96QD9 318 aaKnown RBP16.04■□□□□ 0.16
SCARB1-210ENST00000545493 DMRT1Q9Y5R6 373 aa16.04■□□□□ 0.16
SCARB1-210ENST00000545493 CGB1A6NKQ9 187 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 PPP5D1E7EU14 171 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 H0Y980 276 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 C3orf84H3BNL1 204 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 TMEM127O75204 238 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 AREGP15514 252 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 MAS1LP35410 378 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 FXYD4P59646 89 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 ZNF818PQ6ZRF7 136 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 SLC25A42Q86VD7 318 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 SPAG16Q8N0X2 631 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 Q8N402 240 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 YIPF6Q96EC8 236 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 DIABLOQ9NR28 239 aa16.03■□□□□ 0.16
SCARB1-210ENST00000545493 EDN2P20800 178 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 MECP2P51608 486 aaKnown RBP16.02■□□□□ 0.16
SCARB1-210ENST00000545493 TATDN3Q17R31 274 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 OR4A47Q6IF82 309 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 TMEM17Q86X19 198 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 ZBTB34Q8NCN2 500 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 OR5AP2Q8NGF4 316 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 CCDC140Q96MF4 163 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 FANCD2OSQ96PS1 177 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 SLC5A7Q9GZV3 580 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 ZMAT4Q9H898 229 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 SLC2A9Q9NRM0 540 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 BET1LQ9NYM9 111 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 PEMTQ9UBM1 199 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 ANAPC10Q9UM13 185 aa16.02■□□□□ 0.16
SCARB1-210ENST00000545493 SULT1C2O00338 296 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 RBFOX2O43251 390 aaKnown RBP eCLIP16.01■□□□□ 0.154e-7■■■■■ 34.5
SCARB1-210ENST00000545493 XRCC3O43542 346 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 AIREO43918 545 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 HRASP01112 189 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 CRYGCP07315 174 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 HLA-GP17693 338 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 CBX5P45973 191 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 RPL8P62917 257 aaKnown RBP16.01■□□□□ 0.15
SCARB1-210ENST00000545493 UBE2NLQ5JXB2 153 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 LCN12Q6JVE5 192 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 MUC7Q8TAX7 377 aa16.01■□□□□ 0.15
SCARB1-210ENST00000545493 DPPA5A6NC42 116 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 NDUFB8O95169 186 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 IGHV3-23P01764 117 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 HLA-AP01891 365 aaKnown RBP16■□□□□ 0.15
SCARB1-210ENST00000545493 CTRB1P17538 263 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 PSMB6P28072 239 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 RPS19P39019 145 aaKnown RBP16■□□□□ 0.15
SCARB1-210ENST00000545493 TAS2R20P59543 309 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 LSM3P62310 102 aaKnown RBP16■□□□□ 0.15
SCARB1-210ENST00000545493 CATR1Q13166 79 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 POU2AF1Q16633 256 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 KLK9Q2XQG4 91 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 CTRB2Q6GPI1 263 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 GIMAP1Q8WWP7 306 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 FBXL7Q9UJT9 491 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 KLK9Q9UKQ9 250 aa16■□□□□ 0.15
SCARB1-210ENST00000545493 TRAV3A0A0B4J244 114 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 S1PR2O95136 353 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 REG1AP05451 166 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 TAS2R31P59538 309 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 CROCCP3Q8IVE0 287 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 OR2K2Q8NGT1 345 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 OR51H1Q8NH63 302 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 OR4A5Q8NH83 315 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 IFT46Q9NQC8 304 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 EHFQ9NZC4 300 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 S4R3C0 116 aa15.99■□□□□ 0.15
SCARB1-210ENST00000545493 HYDINQ4G0P3 5121 aa15.98■□□□□ 0.15
SCARB1-210ENST00000545493 IGLV11-55A0A075B6I3 123 aa15.98■□□□□ 0.15
SCARB1-210ENST00000545493 HPRT1P00492 218 aa15.98■□□□□ 0.15
SCARB1-210ENST00000545493 CD300EQ496F6 205 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-210ENST00000545493 FAM209BQ5JX69 171 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms