RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 FAM223AQ8IWN6 122 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 SPAG16Q8N0X2 631 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 PUSL1Q8N0Z8 303 aaKnown RBP9.14□□□□□ -0.95
HDAC4-216ENST00000544989 TMEM167AQ8TBQ9 72 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 RAB2BQ8WUD1 216 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF2Q9BSG1 426 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-216ENST00000544989 PLEKHA2Q9HB19 425 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 BET1LQ9NYM9 111 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 COMMD9Q9P000 198 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 RABL2AQ9UBK7 228 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-216ENST00000544989 RABL2BQ9UNT1 228 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 TNFSF12O43508 249 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 HPGDSO60760 199 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 PMP2P02689 132 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 FCER2P06734 321 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 NQO2P16083 231 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 ELK1P19419 428 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 TBPP20226 339 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 HRH1P35367 487 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 KRTAP10-11P60412 298 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 RPL8P62917 257 aaKnown RBP9.13□□□□□ -0.95
HDAC4-216ENST00000544989 POU2AF1Q16633 256 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 MRGPRG-AS1Q2M3A8 158 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 SNX29P2Q8IUI4 249 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 TTC9CQ8N5M4 171 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 ADAD2Q8NCV1 583 aaKnown RBP9.13□□□□□ -0.95
HDAC4-216ENST00000544989 ELOVL1Q9BW60 279 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF257Q9Y2Q1 563 aa9.13□□□□□ -0.95
HDAC4-216ENST00000544989 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 A0A087WW49 117 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 DPPA5A6NC42 116 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 GPR31O00270 319 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 HLA-DMAP28067 261 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 GNRHRP30968 328 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 TMBIM6P55061 237 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 ERVK-16P61578 105 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 MRPS10P82664 201 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 TATDN3Q17R31 274 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 ASPHD1Q5U4P2 390 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 THOC7Q6I9Y2 204 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 LYSMD2Q8IV50 215 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 CADM3Q8N126 398 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 CASTOR1Q8WTX7 329 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 NAA50Q9GZZ1 169 aaKnown RBP9.12□□□□□ -0.95
HDAC4-216ENST00000544989 HRASLSQ9HDD0 168 aa9.12□□□□□ -0.95
HDAC4-216ENST00000544989 NPIPB5A8MRT5 1133 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 K7EIL1 84 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 IFNA6P05013 189 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF735P0CB33 412 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 HLA-GP17693 338 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 F2RP25116 425 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 UCP3P55916 312 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 BRWD1-AS2P59051 145 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 SSBP1Q04837 148 aaKnown RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 VAX1Q5SQQ9 334 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF343Q6P1L6 599 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 HSD17B13Q7Z5P4 300 aaPredicted RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 SLC38A6Q8IZM9 456 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 VKORC1L1Q8N0U8 176 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 NECAP1Q8NC96 275 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 OR6Q1Q8NGQ2 317 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 OR51H1Q8NH63 302 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 OR4C12Q96R67 309 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 CCDC59Q9P031 241 aaKnown RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 EXTL2Q9UBQ6 330 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 PEF1Q9UBV8 284 aaKnown RBP9.11□□□□□ -0.95
HDAC4-216ENST00000544989 SCOCQ9UIL1 159 aa9.11□□□□□ -0.95
HDAC4-216ENST00000544989 DNAH9Q9NYC9 4486 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 TRBV9A0A0B4J1U6 114 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 WI2-2373I1.2A0A1W2PRP0 233 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 RGS5O15539 181 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 CYB5BO43169 146 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 SAP30O75446 220 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 PGLYRP1O75594 196 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-216ENST00000544989 HIST1H1BP16401 226 aaKnown RBP9.1□□□□□ -0.95
HDAC4-216ENST00000544989 ECI1P42126 302 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 SLURP1P55000 103 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 RHOGP84095 191 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 ACSM6Q6P461 480 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 SSX9Q7RTT3 188 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 CLVS1Q8IUQ0 354 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-216ENST00000544989 ARRDC1Q8N5I2 433 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 FCAMRQ8WWV6 532 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 DGCR14Q96DF8 476 aaKnown RBP9.1□□□□□ -0.95
HDAC4-216ENST00000544989 COMMD5Q9GZQ3 224 aa9.1□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF256Q9Y2P7 627 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-216ENST00000544989 MARCH11A6NNE9 402 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms