RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZNF818PQ6ZRF7 136 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 CMTM1Q8IZ96 169 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 VKORC1L1Q8N0U8 176 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 OR6F1Q8NGZ6 308 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 C15orf40Q8WUR7 153 aa17.94■□□□□ 0.46
CHFR-222ENST00000544093 ZNF2Q9BSG1 426 aaPredicted RBP17.94■□□□□ 0.46
CHFR-222ENST00000544093 HPGDSO60760 199 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 GNRHRP30968 328 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 ECI1P42126 302 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 ALDH3B2P48448 385 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 TTC9CQ8N5M4 171 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 NAA50Q9GZZ1 169 aaKnown RBP17.93■□□□□ 0.46
CHFR-222ENST00000544093 BET1LQ9NYM9 111 aa17.93■□□□□ 0.46
CHFR-222ENST00000544093 FAM223BA6NKX1 122 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 FAM25AB3EWG3 89 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 FAM25CB3EWG5 89 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 FAM25GB3EWG6 89 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 FGF2P09038 288 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 APELAP0DMC3 54 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 NQO2P16083 231 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 RCVRNP35243 200 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 HRH1P35367 487 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 RPL8P62917 257 aaKnown RBP17.92■□□□□ 0.46
CHFR-222ENST00000544093 FAM209BQ5JX69 171 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 AADACL3Q5VUY0 350 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 LPCAT3Q6P1A2 487 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 ACSM6Q6P461 480 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 SNX29P2Q8IUI4 249 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 FAM223AQ8IWN6 122 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 GPHA2Q96T91 129 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 PLEKHA2Q9HB19 425 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 ZNF257Q9Y2Q1 563 aa17.92■□□□□ 0.46
CHFR-222ENST00000544093 SAP30O75446 220 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 HLA-DMAP28067 261 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 RPL27AP46776 148 aaKnown RBP17.91■□□□□ 0.46
CHFR-222ENST00000544093 TSPAN5P62079 268 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 POU2AF1Q16633 256 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 ZNF343Q6P1L6 599 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 LYSMD2Q8IV50 215 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 OR51H1Q8NH63 302 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 ELOVL1Q9BW60 279 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 COMMD9Q9P000 198 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 ZNF256Q9Y2P7 627 aaPredicted RBP17.91■□□□□ 0.46
CHFR-222ENST00000544093 SORL1Q92673 2214 aa17.91■□□□□ 0.46
CHFR-222ENST00000544093 DHFRP00374 187 aa17.9■□□□□ 0.46
CHFR-222ENST00000544093 S100GP29377 79 aa17.9■□□□□ 0.46
CHFR-222ENST00000544093 OR4A47Q6IF82 309 aa17.9■□□□□ 0.46
CHFR-222ENST00000544093 NECAP1Q8NC96 275 aa17.9■□□□□ 0.46
CHFR-222ENST00000544093 OR4C12Q96R67 309 aa17.9■□□□□ 0.46
CHFR-222ENST00000544093 PEF1Q9UBV8 284 aaKnown RBP17.9■□□□□ 0.46
CHFR-222ENST00000544093 TRBV9A0A0B4J1U6 114 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 NPIPB5A8MRT5 1133 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 GPR31O00270 319 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 ZNF735P0CB33 412 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 HLA-GP17693 338 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 RHOGP84095 191 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 C10orf55Q5SWW7 151 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 SSX9Q7RTT3 188 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 OR6Q1Q8NGQ2 317 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 RAB2BQ8WUD1 216 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 BCL7BQ9BQE9 202 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 HRASLSQ9HDD0 168 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 SLC2A9Q9NRM0 540 aa17.89■□□□□ 0.45
CHFR-222ENST00000544093 F2RP25116 425 aa17.88■□□□□ 0.45
CHFR-222ENST00000544093 ERVK-16P61578 105 aa17.88■□□□□ 0.45
CHFR-222ENST00000544093 TATDN3Q17R31 274 aa17.88■□□□□ 0.45
CHFR-222ENST00000544093 FYTTD1Q96QD9 318 aaKnown RBP17.88■□□□□ 0.45
CHFR-222ENST00000544093 B9D2Q9BPU9 175 aa17.88■□□□□ 0.45
CHFR-222ENST00000544093 ANKRD34BA5PLL1 514 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 TEX22C9J3V5 150 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 PGLYRP1O75594 196 aaPredicted RBP17.87■□□□□ 0.45
CHFR-222ENST00000544093 RLN1P04808 185 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 ATP5G2Q06055 141 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 VAX1Q5SQQ9 334 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 DMBX1Q8NFW5 382 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 FXYD6Q9H0Q3 95 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 AKIP1Q9NQ31 210 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 EXTL2Q9UBQ6 330 aa17.87■□□□□ 0.45
CHFR-222ENST00000544093 IL6RP08887 468 aaPredicted RBP17.86■□□□□ 0.45
CHFR-222ENST00000544093 TBPP20226 339 aa17.86■□□□□ 0.45
CHFR-222ENST00000544093 CD69Q07108 199 aa17.86■□□□□ 0.45
CHFR-222ENST00000544093 KLF5Q13887 457 aaPredicted RBP17.86■□□□□ 0.45
CHFR-222ENST00000544093 CADM3Q8N126 398 aa17.86■□□□□ 0.45
CHFR-222ENST00000544093 DGCR14Q96DF8 476 aaKnown RBP17.86■□□□□ 0.45
CHFR-222ENST00000544093 PRR25Q96S07 402 aa17.86■□□□□ 0.45
CHFR-222ENST00000544093 SRSF8Q9BRL6 282 aaKnown RBP17.86■□□□□ 0.45
CHFR-222ENST00000544093 COMMD5Q9GZQ3 224 aa17.86■□□□□ 0.45
CHFR-222ENST00000544093 FAM212BQ9NTI7 297 aaPredicted RBP17.86■□□□□ 0.45
CHFR-222ENST00000544093 HMX3A6NHT5 357 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 CRYGCP07315 174 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 TMBIM6P55061 237 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 UCP3P55916 312 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 ZNF45Q02386 682 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 THOC7Q6I9Y2 204 aaKnown RBP17.85■□□□□ 0.45
CHFR-222ENST00000544093 CLVS1Q8IUQ0 354 aaPredicted RBP17.85■□□□□ 0.45
CHFR-222ENST00000544093 TMEM140Q9NV12 185 aa17.85■□□□□ 0.45
CHFR-222ENST00000544093 LSM4Q9Y4Z0 139 aaKnown RBP17.85■□□□□ 0.45
CHFR-222ENST00000544093 UPK2O00526 184 aa17.84■□□□□ 0.45
CHFR-222ENST00000544093 S1PR2O95136 353 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms