RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 LINC00596Q86U02 117 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 LEAP2Q969E1 77 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 MBP02144 154 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 ADMP35318 185 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 PRAMEF5Q5TYX0 476 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 ASPHD1Q5U4P2 390 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 MOB1BQ7L9L4 216 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 SPRY4Q9C004 299 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 PKIBQ9C010 78 aa12.78□□□□□ -0.36
CNOT9-208ENST00000542068 OR9G9P0C7N8 305 aa12.77□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF90Q03938 601 aa12.77□□□□□ -0.36
CNOT9-208ENST00000542068 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.36
CNOT9-208ENST00000542068 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.36
CNOT9-208ENST00000542068 HIPK2Q9H2X6 1198 aa12.77□□□□□ -0.36
CNOT9-208ENST00000542068 NAGKQ9UJ70 344 aa12.77□□□□□ -0.36
CNOT9-208ENST00000542068 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.36
CNOT9-208ENST00000542068 MARCH11A6NNE9 402 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 C17orf112F2Z3M2 114 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 CD1BP29016 333 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
CNOT9-208ENST00000542068 MDS2Q8NDY4 140 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 OR13A1Q8NGR1 328 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 GGCTO75223 188 aaKnown RBP12.77□□□□□ -0.37
CNOT9-208ENST00000542068 COX5BP10606 129 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 TNFSF10P50591 281 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
CNOT9-208ENST00000542068 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
CNOT9-208ENST00000542068 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-208ENST00000542068 RRHO14718 337 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 NRN1LQ496H8 165 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
CNOT9-208ENST00000542068 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 TRBV20OR9-2A0A075B6H5 130 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 TRAV3A0A0B4J244 114 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 F2Z2F3 143 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 SPCS3P61009 180 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 TIMM9Q9Y5J7 89 aa12.76□□□□□ -0.37
CNOT9-208ENST00000542068 YLPM1P49750 1951 aaKnown RBP12.75□□□□□ -0.37
CNOT9-208ENST00000542068 SPRY3O43610 288 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 RAB4BP61018 213 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 OR5I1Q13606 314 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 BAGE3Q86Y29 109 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 BAGE2Q86Y30 109 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 C9orf106Q8NAJ2 232 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 VN1R17PQ8TDU5 208 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 FAM122AQ96E09 287 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 PARD6AQ9NPB6 346 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
CNOT9-208ENST00000542068 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
CNOT9-208ENST00000542068 TCL1AP56279 114 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 HLA-DRB5Q30154 266 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 OCC1Q8TAD7 63 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 COQ2Q96H96 371 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 SFRP2Q96HF1 295 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 GMPPAQ96IJ6 420 aaPredicted RBP12.75□□□□□ -0.37
CNOT9-208ENST00000542068 SAMD10Q9BYL1 202 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 M0R1B8 84 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 M0R1X1 148 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
CNOT9-208ENST00000542068 RPL39P5Q59GN2 51 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 PRR31Q5SQ13 230 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
CNOT9-208ENST00000542068 FAM90A26D6RGX4 464 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 M0R143 59 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 SS18L1O75177 396 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-208ENST00000542068 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 IER3P46695 156 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
CNOT9-208ENST00000542068 HCFC1P51610 2035 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 ATRXP46100 2492 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 FOXH1O75593 365 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 MYOD1P15172 320 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 GPR12P47775 334 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 MS4A5Q9H3V2 200 aa12.74□□□□□ -0.37
CNOT9-208ENST00000542068 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
CNOT9-208ENST00000542068 CLDN14O95500 239 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 CCKARP32238 428 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 PXMP4Q9Y6I8 212 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 NPIPB11E5RHQ5 1161 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 CDKN1AP38936 164 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
CNOT9-208ENST00000542068 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 OR10G8Q8NGN5 311 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 MLNRO43193 412 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 FTH1P19P0C7X4 201 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 CECR9P0C854 216 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 KRTDAPP60985 99 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 ERVK11-1P61568 191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms