RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 C20orf144Q9BQM9 153 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 FAM103A1Q9BTL3 118 aaKnown RBP7.62□□□□□ -1.19
THBS3-211ENST00000541990 RBM7Q9Y580 266 aaKnown RBP7.62□□□□□ -1.19
THBS3-211ENST00000541990 PLCE1Q9P212 2302 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
THBS3-211ENST00000541990 PMS2P5A8MQ11 134 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 SH2D1BO14796 132 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 VAMP5O95183 116 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 USF3Q68DE3 2245 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 SIRPB1O00241 398 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 CHRNB4P30926 498 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 RAB7AP51149 207 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 SEM1Q6ZVN7 128 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 Q8N7P7 452 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 STPG4Q8N801 248 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 Q8N976 141 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 APH1AQ96BI3 265 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 MSRB2Q9Y3D2 182 aa7.62□□□□□ -1.19
THBS3-211ENST00000541990 TRAV34A0A0B4J273 112 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 TRAPPC2LH3BP13 241 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 M0QZK8 103 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 RPL30P62888 115 aaKnown RBP7.61□□□□□ -1.19
THBS3-211ENST00000541990 TGFBR3Q03167 851 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 PSG7Q13046 419 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 KRTCAP3Q53RY4 240 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 DRAM1Q8N682 238 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 CPT1CQ8TCG5 803 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 SFRP2Q96HF1 295 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 C1QTNF5Q9BXJ0 243 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 VENTXO95231 258 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 CTXN2P0C2S0 81 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 UBE2NP61088 152 aaKnown RBP7.61□□□□□ -1.19
THBS3-211ENST00000541990 IGF2-ASQ6U949 168 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 IGFL2Q6UWQ7 119 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 ZNF808Q8N4W9 903 aaPredicted RBP7.61□□□□□ -1.19
THBS3-211ENST00000541990 Q8NA96 180 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 OR5A2Q8NGI9 324 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 SPSB4Q96A44 273 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 RYDENQ9NUL5 291 aaKnown RBP7.61□□□□□ -1.19
THBS3-211ENST00000541990 FZR1Q9UM11 496 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 TIMM9Q9Y5J7 89 aa7.61□□□□□ -1.19
THBS3-211ENST00000541990 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
THBS3-211ENST00000541990 MAP1AP78559 2803 aaPredicted RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 CFAP46Q8IYW2 2715 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 C5orf49A4QMS7 147 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A10PA6NDY2 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A18PA6NE21 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A16PA6NEW6 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A20PA6NIJ5 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A8PA6NJQ4 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A7PA6NKC0 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A22PA8MWA6 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A12PA8MX19 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A5PA8MXJ8 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A23PA8MXZ1 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 RRHO14718 337 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 SPINK4O60575 86 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 CEACAM4O75871 244 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A15PP0C7V4 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A13PP0C7W8 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A14PP0C7W9 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FAM90A24PP0C7X0 464 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FKBP2P26885 142 aaKnown RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 CDC34P49427 236 aaPredicted RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 EDDM3BP56851 147 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 KRTDAPP60985 99 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 SRSF7Q16629 238 aaKnown RBP eCLIP7.6□□□□□ -1.19
THBS3-211ENST00000541990 TMEM183BQ1AE95 376 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 FBXW9Q5XUX1 488 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 C22orf34Q6ZV56 151 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 ZNF709Q8N972 641 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 DKK4Q9UBT3 224 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 ODAMA1E959 279 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 S1PR2O95136 353 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 COX5AP20674 150 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 S100GP29377 79 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 MKXQ8IYA7 352 aa7.6□□□□□ -1.19
THBS3-211ENST00000541990 SNRNP40Q96DI7 357 aaKnown RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 SF3B5Q9BWJ5 86 aaKnown RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
THBS3-211ENST00000541990 K7EN84 100 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 K7ENP7 123 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 CCL25O15444 150 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 BRWD1-AS2P59051 145 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 TPPP2P59282 170 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 YPEL3P61236 119 aaPredicted RBP7.59□□□□□ -1.19
THBS3-211ENST00000541990 MSMO1Q15800 293 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 CEACAM21Q3KPI0 293 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 ASPHD1Q5U4P2 390 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 INO80CQ6PI98 192 aaPredicted RBP7.59□□□□□ -1.19
THBS3-211ENST00000541990 Q6ZS92 163 aa7.59□□□□□ -1.19
THBS3-211ENST00000541990 OCC1Q8TAD7 63 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms