RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ELLP55199 621 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-216ENST00000541416 ARL6IP1Q15041 203 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 C10orf55Q5SWW7 151 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 LAMTOR1Q6IAA8 161 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 RPP25LQ8N5L8 163 aaKnown RBP9.14□□□□□ -0.95
SNHG1-216ENST00000541416 ZNF645Q8N7E2 425 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 OR4S2Q8NH73 311 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 C5orf30Q96GV9 206 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 CCDC140Q96MF4 163 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 OR2A7Q96R45 310 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 AIFM2Q9BRQ8 373 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 C6orf62Q9GZU0 229 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-216ENST00000541416 THYN1Q9P016 225 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 TEX22C9J3V5 150 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 CYB5BO43169 146 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 KBTBD11O94819 623 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 CRYGCP07315 174 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 PSMB6P28072 239 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 CLDN12P56749 244 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 ZNF585BQ52M93 769 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 LIPKQ5VXJ0 399 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-216ENST00000541416 OR10R2Q8NGX6 335 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-216ENST00000541416 TMEM203Q969S6 136 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 MFFQ9GZY8 342 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 SCN3BQ9NY72 215 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 V9GY05 133 aa9.13□□□□□ -0.95
SNHG1-216ENST00000541416 A0A075B6Q4 140 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 METTL21EPA6NDL7 271 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 PTGES3LE9PB15 166 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 HRASP01112 189 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 IFNA4P05014 189 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 CLEC3BP05452 202 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 GNAO1P09471 354 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 ZNF735P0CB33 412 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 C8orf88P0DMB2 117 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 GNB3P16520 340 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 CALRP27797 417 aaKnown RBP9.12□□□□□ -0.95
SNHG1-216ENST00000541416 PLET1Q6UQ28 207 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 Q6ZS49 121 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 TMEM167AQ8TBQ9 72 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 MAFIPQ8WZ33 124 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 HSD17B10Q99714 261 aaKnown RBP9.12□□□□□ -0.95
SNHG1-216ENST00000541416 KCNK7Q9Y2U2 307 aa9.12□□□□□ -0.95
SNHG1-216ENST00000541416 OR4C46A6NHA9 309 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 DEDDO75618 318 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 IL6RP08887 468 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-216ENST00000541416 HIST1H1DP16402 221 aaKnown RBP9.11□□□□□ -0.95
SNHG1-216ENST00000541416 CTRB1P17538 263 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 DTYMKP23919 212 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 CRHBPP24387 322 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 TCTAP57738 103 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 RPL8P62917 257 aaKnown RBP9.11□□□□□ -0.95
SNHG1-216ENST00000541416 EWSR1Q01844 656 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNHG1-216ENST00000541416 OR2B11Q5JQS5 317 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 CTRB2Q6GPI1 263 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 LAIR2Q6ISS4 152 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 VKORC1L1Q8N0U8 176 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 FBLIM1Q8WUP2 373 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 TCTEX1D2Q8WW35 142 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 GALNT14Q96FL9 552 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 GFI1Q99684 422 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 VCXQ9H320 206 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 RBMX2Q9Y388 322 aaKnown RBP9.11□□□□□ -0.95
SNHG1-216ENST00000541416 OR2W1Q9Y3N9 320 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 S4R3C0 116 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
SNHG1-216ENST00000541416 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 J3QRK9 145 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 MFNGO00587 321 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 PDCD5O14737 125 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 TSPAN4O14817 238 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 HLA-DQB1P01920 261 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 AREGP15514 252 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 RAB6AP20340 208 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 GPR183P32249 361 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 KLK9Q2XQG4 91 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 HES5Q5TA89 166 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 TMEM91Q6ZNR0 172 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 PUSL1Q8N0Z8 303 aaKnown RBP9.1□□□□□ -0.95
SNHG1-216ENST00000541416 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 ACOT13Q9NPJ3 140 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 DAZ1Q9NQZ3 744 aaKnown RBP9.1□□□□□ -0.95
SNHG1-216ENST00000541416 UBQLN2Q9UHD9 624 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 KLK9Q9UKQ9 250 aa9.1□□□□□ -0.95
SNHG1-216ENST00000541416 LSM2Q9Y333 95 aaKnown RBP9.1□□□□□ -0.95
SNHG1-216ENST00000541416 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 HLA-GP17693 338 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-216ENST00000541416 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms