RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 KRTCAP3Q53RY4 240 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 ABHD12Q8N2K0 398 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 SCO2A0A1W2PP80 73 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 PLAUP00749 431 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 TMUB1Q9BVT8 246 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 F2RL2O00254 374 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 OR5P3Q8WZ94 311 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 TSPAN7P41732 249 aa12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 SHISA7A6NL88 538 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 PCSK4Q6UW60 755 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 TCF23Q7RTU1 214 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 OR5A1Q8NGJ0 315 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 CYTL1Q9NRR1 136 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 TAF1LQ8IZX4 1826 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 TRAV1-1A0A0B4J248 108 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 RRHO14718 337 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 DLEU1O43261 78 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 ADMP35318 185 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 REG1BP48304 166 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 RAB9AP51151 201 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 HIST1H1AQ02539 215 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 MRPL13Q9BYD1 178 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 ANKRD36A6QL64 1941 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 B4E171 279 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 AMBPP02760 352 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 CCL4P13236 92 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 GPR183P32249 361 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 RELQ04864 619 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 TFF3Q07654 80 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 C1orf194Q5T5A4 169 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 IGHV3-21A0A0B4J1V1 117 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 ATP5LO75964 103 aa12.73□□□□□ -0.37
SMARCA4-207ENST00000541122 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 FAM89BQ8N5H3 189 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 SYT8Q8NBV8 401 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 OR4X2Q8NGF9 303 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 PEX7O00628 323 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 CCL20P78556 96 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 GFI1Q99684 422 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 GNB1LQ9BYB4 327 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 RPP21Q9H633 154 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 A0A1B0GWB2 263 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 PNKDQ8N490 385 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 LINC00470Q9BZP3 86 aa12.72□□□□□ -0.37
SMARCA4-207ENST00000541122 TDRD15B5MCY1 1934 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 IFNL4K9M1U5 179 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 FOXA3P55318 350 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 FMC1Q96HJ9 113 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 A0A1B0GUT8 65 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 CGAP01215 116 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 ID3Q02535 119 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 OR4C13Q8NGP0 309 aa12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 DUSP15Q9H1R2 295 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-207ENST00000541122 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 LYPD3O95274 346 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 SCGB1A1P11684 91 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 EMP1P54849 157 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 NRN1LQ496H8 165 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 DCAF10Q5QP82 559 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 PRELID3AQ96N28 172 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 SPSB2Q99619 263 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 ZNF638Q14966 1978 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 NDUFA2O43678 99 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 CCL1P22362 96 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 FAM214BQ7L5A3 538 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 CCL13Q99616 98 aa12.71□□□□□ -0.38
SMARCA4-207ENST00000541122 H7C2G1 150 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 GDF9O60383 454 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 MFAP4P55083 255 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 J3KRW8 73 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 SNRPCP09234 159 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 PAPPA-AS1Q5QFB9 102 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 CX3CL1P78423 397 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 FAM53AQ6NSI3 398 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 CXCL1P09341 107 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 APELAP0DMC3 54 aa12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 GTF3AQ92664 365 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-207ENST00000541122 ST20Q9HBF5 79 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms