RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PLA2G10O15496 165 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 MPDU1O75352 247 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 TRAPPC6AO75865 159 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 HPRT1P00492 218 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 OXTP01178 125 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 IGLV3-19P01714 112 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 CRYGDP07320 174 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 CISD3P0C7P0 127 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 GABRA2P47869 451 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 CLDN6P56747 220 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 TAS2R30P59541 319 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 RAB8AP61006 207 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 SELENOWP63302 87 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 ST3GAL4Q11206 333 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 KLRB1Q12918 225 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 OR8B8Q15620 311 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 ATP6AP1LQ52LC2 224 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DMRTC1Q5HYR2 192 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4L9Q6RFH8 374 aaPredicted RBP3.16□□□□□ -1.9
YBX3-210ENST00000540975 AGTRAPQ6RW13 159 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 C12orf54Q6X4T0 127 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 CA13Q8N1Q1 262 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 UMODL1-AS1Q8N2C9 162 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 TMEM159Q96B96 161 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 ADTRPQ96IZ2 230 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 ZNF649Q9BS31 505 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 ACOT13Q9NPJ3 140 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 UBQLN4Q9NRR5 601 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 MED29Q9NX70 200 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 AKAP11Q9UKA4 1901 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
YBX3-210ENST00000540975 HIVEP2P31629 2446 aa3.15□□□□□ -1.9
YBX3-210ENST00000540975 SLX4Q8IY92 1834 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 ZNF816-ZNF321PA0A0X1KG74 233 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 TMEM189A5PLL7 270 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 COLCA2A8K830 154 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 PDCD5O14737 125 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 HSD17B6O14756 317 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 FABP7O15540 132 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 SYNGR1O43759 233 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR7C1O76099 320 aaPredicted RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 APOC3P02656 99 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OPN1SWP03999 348 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 APODP05090 189 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 CD2P06729 351 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 UCHL1P09936 223 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 SULT1A3P0DMM9 295 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 SULT1A4P0DMN0 295 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 HTR1DP28221 377 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 PYCR1P32322 319 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 LSM3P62310 102 aaKnown RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 RPL31P62899 125 aaKnown RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 ARG2P78540 354 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 RHOGP84095 191 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 RUNX1Q01196 453 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 RHEBQ15382 184 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 GUSBP1Q15486 140 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 HIST3H3Q16695 136 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 LGALSLQ3ZCW2 172 aaPredicted RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 TRMT12Q53H54 448 aaKnown RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 MESTQ5EB52 335 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 COA6Q5JTJ3 125 aaKnown RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 C10orf91Q5T1B1 145 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 HIST2H3PS2Q5TEC6 136 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 TMEM215Q68D42 235 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 PRSS54Q6PEW0 395 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 TBPL2Q6SJ96 375 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 ALKAL1Q6UXT8 129 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 CALHM3Q86XJ0 350 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OSR2Q8N2R0 312 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR52L1Q8NGH7 329 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR4C13Q8NGP0 309 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR13C8Q8NGS7 320 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR6K6Q8NGW6 343 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR2G2Q8NGZ5 317 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR5W2Q8NH69 310 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 OR1S1Q8NH92 325 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 RXFP4Q8TDU9 374 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 ZNF431Q8TF32 576 aaPredicted RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 TEX37Q96LM6 180 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 CCDC115Q96NT0 180 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 CDX2Q99626 313 aaPredicted RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 DOHHQ9BU89 302 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 ZNF436Q9C0F3 470 aaPredicted RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 TMEM126AQ9H061 195 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 LPAR5Q9H1C0 372 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 MS4A6AQ9H2W1 248 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 PRORYQ9H606 182 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
YBX3-210ENST00000540975 FAM206AQ9NX38 181 aa3.15□□□□□ -1.91
YBX3-210ENST00000540975 IDI2-AS1Q9NZ38 188 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms