RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ACY3	Q96HD9	319 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RAB40C	Q96S21	281 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	P2RX4	Q99571	388 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FGF23	Q9GZV9	251 aa	Predicted RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	BEX4	Q9NWD9	120 aa	Predicted RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KCNIP1	Q9NZI2	227 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	EML6	Q6ZMW3	1958 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CLEC18A	A5D8T8	446 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		H0Y980	276 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SYNGR1	O43759	233 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TUSC2	O75896	110 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CLEC18C	Q8NCF0	446 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	WNT5B	Q9H1J7	359 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MANBAL	Q9NQG1	85 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MTCH1	Q9NZJ7	389 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RNF150	Q9ULK6	438 aa		4.74	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NAPSA	O96009	420 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RPLP1	P05386	114 aa	Known RBP	4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GRP	P07492	148 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	THBS3	P49746	956 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HBG1	P69891	147 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HBG2	P69892	147 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	REL	Q04864	619 aa	Predicted RBP	4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR5I1	Q13606	314 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GCSAML	Q5JQS6	135 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM42	Q69YG0	159 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PCSK4	Q6UW60	755 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TGIF2LY	Q8IUE0	185 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10G9	Q8NGN4	311 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10G7	Q8NGN6	311 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CCKAR	P32238	428 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CDKN1A	P38936	164 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TFF3	Q07654	80 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FFAR4	Q5NUL3	377 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		Q6ZSR3	168 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF114	Q8NC26	417 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NUP37	Q8NFH4	326 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	VN1R17P	Q8TDU5	208 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NINJ1	Q92982	152 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ABHD14B	Q96IU4	210 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CLN8	Q9UBY8	286 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPTBN1	Q01082	2364 aa	Known RBP	4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TCF21	O43680	179 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NDUFB4	O95168	129 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KRAS	P01116	189 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FRMD6-AS1	P0C7T7	363 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10J1	P30954	320 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GABRA2	P47869	451 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SERF2	P84101	59 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PRDX4	Q13162	271 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LRRC10	Q5BKY1	277 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPATA46	Q5T0L3	261 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FAM103A1	Q9BTL3	118 aa	Known RBP	4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR2W1	Q9Y3N9	320 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DNAJC13	O75165	2243 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PTPRB	P23467	1997 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FREM1	Q5H8C1	2179 aa		4.73	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	C11orf94	C9JXX5	98 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		F2Z2F3	143 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NDUFB3	O43676	98 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ADM	P35318	185 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SRP14	P37108	136 aa	Known RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ATP5G3	P48201	142 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		Q6ZWC4	215 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR8B3	Q8NGG8	313 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SGMS2	Q8NHU3	365 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DTD1	Q8TEA8	209 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR8B2	Q96RD0	313 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HSPB9	Q9BQS6	159 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RNF7	Q9UBF6	113 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	USF3	Q68DE3	2245 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MAST4	O15021	2626 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NBEA	Q8NFP9	2946 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KIR2DS1	A0A191URI9	304 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPINK4	O60575	86 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GGCT	O75223	188 aa	Known RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RBMXL2	O75526	392 aa	Known RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CBLN1	P23435	193 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KIR2DS4	P43632	304 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KIR2DS1	Q14954	304 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	KCNIP4	Q6PIL6	250 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FOXL2NB	Q6ZUU3	175 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CMTM2	Q8TAZ6	248 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PINX1	Q96BK5	328 aa	Known RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NEIL1	Q96FI4	390 aa	Predicted RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PSMG3	Q9BT73	122 aa	Predicted RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LPAR2	Q9HBW0	351 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IL36G	Q9NZH8	169 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MED13	Q9UHV7	2174 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DUXB	A0A1W2PPF3	345 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SIRPB1	O00241	398 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NGF	P01138	241 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SLC25A16	P16260	332 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LINC00205	P59089	165 aa		4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF672	Q499Z4	452 aa	Predicted RBP	4.72	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF585B	Q52M93	769 aa		4.72	□□□□□ -1.65

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