RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 IMP4Q96G21 291 aaKnown RBP0.78□□□□□ -2.28
MDM2-227ENST00000540709 NMNAT3Q96T66 252 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 MIEN1Q9BRT3 115 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 NKX6-2Q9C056 277 aaPredicted RBP0.78□□□□□ -2.28
MDM2-227ENST00000540709 OR51I1Q9H343 314 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 OR51I2Q9H344 312 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 UCK1Q9HA47 277 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 XPNPEP1Q9NQW7 623 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.78□□□□□ -2.28
MDM2-227ENST00000540709 VPS29Q9UBQ0 182 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 MRPS16Q9Y3D3 137 aaKnown RBP0.78□□□□□ -2.28
MDM2-227ENST00000540709 PXMP4Q9Y6I8 212 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 C9orf84Q5VXU9 1444 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 RIMS2Q9UQ26 1411 aa0.78□□□□□ -2.28
MDM2-227ENST00000540709 DNMT1P26358 1616 aaKnown RBP0.78□□□□□ -2.29
MDM2-227ENST00000540709 NYNRINQ9P2P1 1898 aaKnown RBP0.78□□□□□ -2.29
MDM2-227ENST00000540709 ATG2BQ96BY7 2078 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 MED13Q9UHV7 2174 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 IGKV2-40A0A087WW87 121 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 TMEM269A0A1B0GVZ9 245 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 C11orf86A6NJI1 115 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 F8W036 122 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 COX7A2LO14548 114 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 IGKV2D-40P01614 121 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 IGLV3-27P01718 113 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 IGHV1-69P01742 117 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 ZNF705DP0CH99 300 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 CD79AP11912 226 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 KCNE1P15382 129 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 NPPCP23582 126 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 CRHBPP24387 322 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 HAAOP46952 286 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 DEFA1P59665 94 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 NAA20P61599 178 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 RPS24P62847 133 aaKnown RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 RPL30P62888 115 aaKnown RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 HOXC5Q00444 222 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 EMX1Q04741 257 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 FADDQ13158 208 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 PMAIP1Q13794 54 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 C1orf194Q5T5A4 169 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 C5orf46Q6UWT4 87 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 OR5B17Q8NGF7 314 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 OR2D3Q8NGH3 330 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 CDC26Q8NHZ8 85 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 JOSD2Q8TAC2 188 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 ANKRD7Q92527 254 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 FGF13Q92913 245 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 GNPNAT1Q96EK6 184 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 DCUN1D1Q96GG9 259 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 SFRP2Q96HF1 295 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 ERMAPQ96PL5 475 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 PHB2Q99623 299 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 CCDC94Q9BW85 323 aaPredicted RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 C11orf1Q9H5F2 150 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 C16orf95Q9H693 158 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 PSTPIP2Q9H939 334 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 GPR84Q9NQS5 396 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 TAAR3PQ9P1P4 343 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 ANAPC10Q9UM13 185 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 HHLA2Q9UM44 414 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 ANGPT4Q9Y264 503 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 PKIGQ9Y2B9 76 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 NUP153P49790 1475 aaKnown RBP0.77□□□□□ -2.29
MDM2-227ENST00000540709 NCKAP5O14513 1909 aa0.77□□□□□ -2.29
MDM2-227ENST00000540709 TRPM6Q9BX84 2022 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CHD2O14647 1828 aaKnown RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 TRAV41A0A0B4J266 112 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 A0A1B0GV50 99 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 A0A1B0GVG6 124 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 MDFIC2A0A1B0GVS7 189 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR6C6A6NF89 314 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 TMEM210A6NLX4 147 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CLDN24A6NM45 220 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR4C45A6NMZ5 311 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR11H12B2RN74 326 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 DISC1C4P0D8 188 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 EEF1E1-BLOC1S5C9J1V9 151 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 I3L521 148 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 PSMD12O00232 456 aaPredicted RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 CNIH1O95406 144 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 APOMO95445 188 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 FGF6P10767 208 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CRYBB3P26998 211 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 S100A7P31151 101 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OPRM1P35372 400 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CCR2P41597 374 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 GABRA2P47869 451 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 MARCKSL1P49006 195 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 RAB13P51153 203 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR4D2P58180 307 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 FXYD7P58549 80 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 TAS2R30P59541 319 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 FGF12P61328 243 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 SRSF6Q13247 344 aaKnown RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 TMED2Q15363 201 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 GRK1Q15835 563 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 HIST3H3Q16695 136 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 GLT8D1Q68CQ7 371 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms