RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SLC16A13Q7RTY0 426 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 MFSD4AQ8N468 514 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 OR4A5Q8NH83 315 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 BORCS5Q969J3 196 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 EEF1AKMT3Q96AZ1 226 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 SLC2A9Q9NRM0 540 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 ADAM30Q9UKF2 790 aa11.62□□□□□ -0.55
UBE3B-211ENST00000539843 ELF5Q9UKW6 265 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-211ENST00000539843 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 A6NJ64 397 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 ARL3P36405 182 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
UBE3B-211ENST00000539843 MSMO1Q15800 293 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 NR2C2APQ86WQ0 139 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 VKORC1L1Q8N0U8 176 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 BEST4Q8NFU0 473 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 SECTM1Q8WVN6 248 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 YTHDF1Q9BYJ9 559 aaKnown RBP11.61□□□□□ -0.55
UBE3B-211ENST00000539843 PLEKHA3Q9HB20 300 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 HRASLSQ9HDD0 168 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 THYN1Q9P016 225 aa11.61□□□□□ -0.55
UBE3B-211ENST00000539843 RYR3Q15413 4870 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 LCE6AA0A183 80 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 HMX3A6NHT5 357 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 LGALS9O00182 355 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 SPARTQ8N0X7 666 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 PUSL1Q8N0Z8 303 aaKnown RBP11.6□□□□□ -0.55
UBE3B-211ENST00000539843 OR13F1Q8NGS4 319 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 THAP7Q9BT49 309 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-211ENST00000539843 DIABLOQ9NR28 239 aa11.6□□□□□ -0.55
UBE3B-211ENST00000539843 TRAV18A0A075B6X5 111 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 IZUMO1RA6ND01 250 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 C2orf70A6NJV1 201 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 PPP5D1E7EU14 171 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 TMEM127O75204 238 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 RBMXL2O75526 392 aaKnown RBP11.59□□□□□ -0.55
UBE3B-211ENST00000539843 JTBO76095 146 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 ZNF735P0CB33 412 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 FOLR2P14207 255 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 HLA-GP17693 338 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 PSMB6P28072 239 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 FCGR2CP31995 323 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 CBX5P45973 191 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 MXD1Q05195 221 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 ANKRD55Q3KP44 614 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 IDNKQ5T6J7 187 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 GPHB5Q86YW7 130 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 CD300LFQ8TDQ1 290 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 COMMD5Q9GZQ3 224 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 BET1LQ9NYM9 111 aa11.59□□□□□ -0.55
UBE3B-211ENST00000539843 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
UBE3B-211ENST00000539843 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 LOC100506127A0A0U1RQW1 187 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 ZNF320A2RRD8 509 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBE3B-211ENST00000539843 TNFSF12O43508 249 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 OR2C1O95371 312 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 PPYP01298 95 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 IGLV2-14P01704 120 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 CRYGCP07315 174 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 NQO2P16083 231 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 SDC2P34741 201 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 MECP2P51608 486 aaKnown RBP11.58□□□□□ -0.56
UBE3B-211ENST00000539843 TAS2R31P59538 309 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 DEFB114Q30KQ6 69 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 CLEC19AQ6UXS0 136 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 HOGA1Q86XE5 327 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 SPAG16Q8N0X2 631 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 SLC5A7Q9GZV3 580 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
UBE3B-211ENST00000539843 SSX5O60225 188 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 HPRT1P00492 218 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-211ENST00000539843 FXYD4P59646 89 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 HERV-K104P61576 105 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 ERVK-16P61578 105 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 TIMM50Q3ZCQ8 353 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-211ENST00000539843 THOC7Q6I9Y2 204 aaKnown RBP11.57□□□□□ -0.56
UBE3B-211ENST00000539843 ZNF773Q6PK81 442 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 MARC2Q969Z3 335 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
UBE3B-211ENST00000539843 IFT46Q9NQC8 304 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
UBE3B-211ENST00000539843 NDUFB8O95169 186 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 IGHV3-23P01764 117 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 HLA-AP01891 365 aaKnown RBP11.56□□□□□ -0.56
UBE3B-211ENST00000539843 CTRB1P17538 263 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms