RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CPNE2Q96FN4 548 aaPredicted RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 NOL4LQ96MY1 436 aaPredicted RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 WNT10AQ9GZT5 417 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 SMDT1Q9H4I9 107 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 SEC14L6B5MCN3 397 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 SDCBPO00560 298 aaPredicted RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 RBBP9O75884 186 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 OR8U8P0C7N1 319 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 AKAIN1P0CW23 69 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 NPBWR1P48145 328 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 CYCSP99999 105 aaKnown RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 RHEBQ15382 184 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 RAB11BQ15907 218 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 ABCA11PQ4W5N1 156 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 RNASE10Q5GAN6 216 aaKnown RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 C11orf88Q6PI97 169 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 ETV3LQ6ZN32 361 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 FAM89BQ8N5H3 189 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 NKAIN3Q8N8D7 197 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 OR5M8Q8NGP6 311 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 ZNF596Q8TC21 504 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 C2CD4CQ8TF44 421 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 TOMM40LQ969M1 308 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 CITED2Q99967 270 aaPredicted RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 SLC25A33Q9BSK2 321 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 TM2D1Q9BX74 207 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 ZNF471Q9BX82 626 aaPredicted RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 NPFFR1Q9GZQ6 430 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 TAF9BQ9HBM6 251 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 CHMP1AQ9HD42 196 aaPredicted RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 TREM1Q9NP99 234 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 MBNL3Q9NUK0 354 aaKnown RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 GAR1Q9NY12 217 aaKnown RBP5.74□□□□□ -1.49
LMO3-220ENST00000539232 MTFP1Q9UDX5 166 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 AK3Q9UIJ7 227 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 TRAPPC2LQ9UL33 140 aa5.74□□□□□ -1.49
LMO3-220ENST00000539232 TRBV6-7A0A0A0MS04 114 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TRAV14DV4A0A0A6YYC5 116 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 IGHV1-3A0A0C4DH29 117 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 IGKV1-6A0A0C4DH72 117 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TEX13DA0A0J9YY54 714 aaPredicted RBP5.73□□□□□ -1.49
LMO3-220ENST00000539232 TMEM272A0A1B0GTI8 110 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR5H14A6NHG9 310 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 SLC17A2O00624 439 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 GOSR2O14653 212 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 HSD17B6O14756 317 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TAAR5O14804 337 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TCAPO15273 167 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TXNL1O43396 289 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 BPNT1O95861 308 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 NAPSAO96009 420 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 CD74P04233 296 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 CD5P06127 495 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 LINC00614P0C842 121 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 RAB5AP20339 215 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 GZMHP20718 246 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 BLVRBP30043 206 aaPredicted RBP5.73□□□□□ -1.49
LMO3-220ENST00000539232 DDTP30046 118 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 LUMP51884 338 aaPredicted RBP5.73□□□□□ -1.49
LMO3-220ENST00000539232 PRRX1P54821 245 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 LINC00205P59089 165 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 ACTBP60709 375 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 NHLH2Q02577 135 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 GAGE1Q13065 139 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 MADCAM1Q13477 382 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 HERPUD1Q15011 391 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 C2orf76Q3KRA6 126 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR52W1Q6IF63 320 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 C18orf65Q6ZTR6 163 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 MOB3BQ86TA1 216 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 LINC00596Q86U02 117 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 BAP18Q8IXM2 172 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 ODF3L1Q8IXM7 274 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 Q8N6K4 173 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR56B1Q8NGI3 324 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR10X1Q8NGY0 326 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR52I2Q8NH67 350 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR2T6Q8NHC8 308 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 NUDCD2Q8WVJ2 157 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 MAFIPQ8WZ33 124 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 RPEQ96AT9 228 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 FAM3DQ96BQ1 224 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 R3HDM4Q96D70 268 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 ARHGAP5-AS1Q96IT6 56 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 SMIM8Q96KF7 97 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 TMEM59Q9BXS4 323 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 OR1A1Q9P1Q5 309 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 GNG12Q9UBI6 72 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 LINC00527Q9UJ94 153 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 FLVCR2Q9UPI3 526 aa5.73□□□□□ -1.49
LMO3-220ENST00000539232 RYR1P21817 5038 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 PLXNB1O43157 2135 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 IGKV1D-8A0A087WSZ0 117 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 A0A0A6YYH2 397 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A10PA6NDY2 464 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 A6NJ64 397 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A7PA6NKC0 464 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms