RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 DOCK11Q5JSL3 2073 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 PMS2P5A8MQ11 134 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 TMEM238C9JI98 176 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 IGLV2-14P01704 120 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 ATP5G3P48201 142 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 TFF3Q07654 80 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 SMIM15Q7Z3B0 74 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 Q8N976 141 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 APOBEC3DQ96AK3 386 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-209ENST00000538654 APH1AQ96BI3 265 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 KCNS1Q96KK3 526 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 FOXB1Q99853 325 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 NRN1Q9NPD7 142 aa7.58□□□□□ -1.2
SNHG1-209ENST00000538654 TBL2Q9Y4P3 447 aaKnown RBP7.58□□□□□ -1.2
SNHG1-209ENST00000538654 TNRC6BQ9UPQ9 1833 aaKnown RBP7.58□□□□□ -1.2
SNHG1-209ENST00000538654 LRRC30A6NM36 301 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 SNAI2O43623 268 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 MPDU1O75352 247 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 GPM6AP51674 278 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 FOXL2P58012 376 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 PMCHL1Q16048 86 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 ABHD17BQ5VST6 288 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 WDR74Q6RFH5 385 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-209ENST00000538654 PNKDQ8N490 385 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF114Q8NC26 417 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 DERL1Q9BUN8 251 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 CHCHD2Q9Y6H1 151 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-209ENST00000538654 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 CXorf1O96002 111 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 AMTP48728 403 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 TGFBR3Q03167 851 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 AAED1Q7RTV5 226 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 OR1L1Q8NH94 360 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 HARBI1Q96MB7 349 aa7.57□□□□□ -1.2
SNHG1-209ENST00000538654 FAM103A1Q9BTL3 118 aaKnown RBP7.57□□□□□ -1.2
SNHG1-209ENST00000538654 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 HAX1O00165 279 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 PPBPP02775 128 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 IER3P46695 156 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
SNHG1-209ENST00000538654 DCAF12Q5T6F0 453 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 BADQ92934 168 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 SFXN3Q9BWM7 321 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 OR1A1Q9P1Q5 309 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 IGHV2OR16-5A0A0B4J2B6 119 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 IGHV2-70DA0A0C4DH43 119 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 C9JCJ5 164 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 WDR1O75083 606 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 PATE4P0C8F1 98 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 LIFP15018 202 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 CFHR1Q03591 330 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 TRIP6Q15654 476 aaKnown RBP7.56□□□□□ -1.2
SNHG1-209ENST00000538654 MRPL21Q7Z2W9 205 aaKnown RBP7.56□□□□□ -1.2
SNHG1-209ENST00000538654 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 BORCS7Q96B45 105 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 HS3ST6Q96QI5 342 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 IL36RNQ9UBH0 155 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 WDR83OSQ9Y284 106 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 KNL1Q8NG31 2342 aa7.56□□□□□ -1.2
SNHG1-209ENST00000538654 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 TRAV24A0A0B4J272 114 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 A0A1W2PQM1 296 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 S1PR2O95136 353 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 MT-CO2P00403 227 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 TSPOP30536 169 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 HERV-K104P63124 156 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 NRN1LQ496H8 165 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 MMD2Q8IY49 270 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 RAB1BQ9H0U4 201 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 DLL3Q9NYJ7 618 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 LAMA2P24043 3122 aaKnown RBP7.55□□□□□ -1.2
SNHG1-209ENST00000538654 IGHV1-69-2A0A0G2JMI3 117 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 A0A0J9YW62 118 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 A0A1W2PR80 420 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-209ENST00000538654 P0C879 139 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 S100A7P31151 101 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 CATR1Q13166 79 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 CEACAM16Q2WEN9 425 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 FAM58AQ8N1B3 248 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 TMEM45BQ96B21 275 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 UHRF2Q96PU4 802 aa7.55□□□□□ -1.2
SNHG1-209ENST00000538654 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-209ENST00000538654 TNRC6AQ8NDV7 1962 aaKnown RBP7.55□□□□□ -1.2
SNHG1-209ENST00000538654 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ODAMA1E959 279 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 RAB29O14966 203 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ZIC3O60481 467 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 OPRK1P41145 380 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ATP5IP56385 69 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-209ENST00000538654 STUMQ69YW2 141 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms