RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FAM53AQ6NSI3 398 aaPredicted RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 Q6ZN92 141 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 DCAF16Q9NXF7 216 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 A0A0G2JLM5 398 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 PQLC2LA1A4F0 135 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 TMEM14DPA8MWL7 114 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 J3QKU1 62 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 ERVH48-1M5A8F1 160 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 SELENOTP62341 195 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 RNF212Q495C1 297 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 C20orf204Q6ZNR8 217 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 PHYHIPLQ96FC7 376 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 DNAJC4Q9NNZ3 241 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 HSPB7Q9UBY9 170 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 GBF1Q92538 1859 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 SIAH2O43255 324 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 MAS1LP35410 378 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 CLLU1Q5K131 121 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 FAM74A4Q5TZK3 123 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 Q71RC1 249 aaPredicted RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 PLPPR1Q8TBJ4 325 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 WBP1Q96G27 269 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 SEC11CQ9BY50 192 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 PHLDA3Q9Y5J5 127 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 TMEM262E9PQX1 116 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 COMPP49747 757 aaPredicted RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 DLX6P56179 175 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 TMEM252Q8N6L7 170 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 MAPK1IP1LQ8NDC0 245 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 MRPL30Q8TCC3 161 aaKnown RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 TP53RKQ96S44 253 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 C5orf66Q9H5L9 145 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 LINC00527Q9UJ94 153 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 FOXI3A8MTJ6 420 aaPredicted RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 CLPSP04118 112 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 PGA5P0DJD9 388 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 ZP3P21754 424 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TSPOP30536 169 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 IER3P46695 156 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 OR4A47Q6IF82 309 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 C17orf98A8MV24 154 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 APCSP02743 223 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 AREGP15514 252 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TMEM219Q86XT9 240 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 OR8A1Q8NGG7 326 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 OR51G1Q8NGK1 321 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 MYOZ3Q8TDC0 251 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 OR51M1Q9H341 326 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 EFNA2O43921 213 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 SAA2P0DJI9 122 aaPredicted RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 ARL14EPLP0DKL9 152 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TCTAP57738 103 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 Q6ZS92 163 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 LINC00305Q7Z4B0 112 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 C8orf46Q8TAG6 207 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 MARVELD3Q96A59 401 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 OR10C1Q96KK4 312 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 SCN8AQ9UQD0 1980 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 LY6HO94772 140 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 MMP9P14780 707 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 ANOS1P23352 680 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 NBL1P41271 181 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TMEM187Q14656 261 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 C19orf54Q5BKX5 351 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 BRD3OSQ6XYD6 125 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 FAM90A1Q86YD7 464 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 SLC25A28Q96A46 364 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TMEM133Q9H2Q1 129 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 F12P00748 615 aaPredicted RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 PLA2G2CQ5R387 149 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TOMM20LQ6UXN7 152 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 WNT10AQ9GZT5 417 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 NBR2O15453 112 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 ACAA1P09110 424 aaPredicted RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 NUTF2P61970 127 aaKnown RBP4.5□□□□□ -1.69
LRP6-203ENST00000538239 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 ZNF56Q15929 161 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 TAF15Q92804 592 aaKnown RBP eCLIP4.5□□□□□ -1.69
LRP6-203ENST00000538239 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
LRP6-203ENST00000538239 RNF223E7ERA6 249 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 NDUFB4O95168 129 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 MEOX2P50222 304 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 HLA-DRB5Q30154 266 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 DEFB121Q5J5C9 76 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 DPPA3Q6W0C5 159 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 ZNF525Q8N782 197 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 PGLYRP4Q96LB8 373 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 DUX3Q96PT4 197 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 MRPL13Q9BYD1 178 aaKnown RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 C9JCJ5 164 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms