RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 APCSP02743 223 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 FAM87AP0C7U9 286 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF17P17021 662 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 PAX9P55771 341 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 RAC3P60763 192 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 RP1P56715 2156 aa9.2□□□□□ -0.94
CLSTN3-207ENST00000537408 PPIAL4EA0A075B759 164 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 C9orf118A6NHY6 69 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PPIAL4DF5H284 164 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 AMY1AP04745 511 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PPIAL4FP0DN26 164 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 CD1BP29016 333 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF121P58317 390 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 CDCP2Q5VXM1 449 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 OR8B12Q8NGG6 310 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF442Q9H7R0 627 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 SPCS1Q9Y6A9 102 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 EGR1P18146 543 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PSG4Q00888 419 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 MALLQ13021 153 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 RNASEKQ6P5S7 137 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM251Q8N6I4 163 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 OR5D13Q8NGL4 314 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 DPF1Q92782 380 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 Q96M66 194 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 VSTM2LQ96N03 204 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PILRAQ9UKJ1 303 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 SVILO95425 2214 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 H3BUT2 72 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 IGHMP01871 453 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 FABP2P12104 132 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 C1QL2Q7Z5L3 287 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PIGTQ969N2 578 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 FANCMQ8IYD8 2048 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 NAPSAO96009 420 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 IGHG1P01857 330 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 SLC25A6P12236 298 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 CRYBB3P26998 211 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 RCHY1Q96PM5 261 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM147Q9BVK8 224 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PLEK2Q9NYT0 353 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 SPTBN4Q9H254 2564 aa9.19□□□□□ -0.94
CLSTN3-207ENST00000537408 PLP2Q04941 152 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 UFSP1Q6NVU6 142 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 NBASA2RRP1 2371 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 H3BRM9 83 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 MGST1P10620 155 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 PP6455Q8WZ26 134 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 DOCK9Q9BZ29 2069 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 H0Y980 276 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 SLC17A3O00476 420 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 ISLRO14498 428 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 LY6DQ14210 128 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 TBR1Q16650 682 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF766Q5HY98 468 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 OR8B3Q8NGG8 313 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF721Q8TF20 911 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 CYYR1Q96J86 154 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 OR8B2Q96RD0 313 aa9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-207ENST00000537408 SPINK4O60575 86 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 ADH4P08319 380 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 C17orf82Q86X59 251 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 GAPTQ8N292 157 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 PGPEP1LA6NFU8 196 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 K7ENP7 123 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 INO80CQ6PI98 192 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 OR2Z1Q8NG97 314 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 VSTM2AQ8TAG5 236 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 SPTSSAQ969W0 71 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CHRNA10Q9GZZ6 450 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CLCF1Q9UBD9 225 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CLDN1O95832 211 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CLDN17P56750 224 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM97Q5BJF2 176 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM211Q6ICI0 200 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CACNA1AO00555 2505 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CELA3BP08861 270 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 UQCRFS1P47985 274 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 ATP5G3P48201 142 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF841Q6ZN19 808 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 SAP30LQ9HAJ7 183 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 CACNG5Q9UF02 275 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 TRAPPC2LQ9UL33 140 aa9.17□□□□□ -0.94
CLSTN3-207ENST00000537408 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 FRG2CA6NGY1 282 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 H3BMH7 237 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 STAG3L2P0CL84 134 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 SMIM10L1P0DMW3 83 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms