RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
SMG6-203ENST00000536871 ACTR3CQ9C0K3 210 aaPredicted RBP11.16□□□□□ -0.62
SMG6-203ENST00000536871 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
SMG6-203ENST00000536871 SLC39A9Q9NUM3 307 aa11.16□□□□□ -0.62
SMG6-203ENST00000536871 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 CTXND1A0A1B0GTU2 59 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.62
SMG6-203ENST00000536871 A0A1W2PPH5 198 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 M0R036 132 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 CCL21O00585 134 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 CYB5BO43169 146 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.62
SMG6-203ENST00000536871 BCL2P10415 239 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 CD1BP29016 333 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
SMG6-203ENST00000536871 ARL6IP6Q8N6S5 226 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 ZNF383Q8NA42 475 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 RCC1LQ96I51 464 aaKnown RBP11.15□□□□□ -0.62
SMG6-203ENST00000536871 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
SMG6-203ENST00000536871 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 CCL20P78556 96 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 ICAM4Q14773 271 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 ACOT6Q3I5F7 207 aaPredicted RBP11.15□□□□□ -0.63
SMG6-203ENST00000536871 AWAT1Q58HT5 328 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 DUX4L9Q6RFH8 374 aaPredicted RBP11.15□□□□□ -0.63
SMG6-203ENST00000536871 TNFRSF14Q92956 283 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 NEIL1Q96FI4 390 aaPredicted RBP11.15□□□□□ -0.63
SMG6-203ENST00000536871 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 RPS10P5Q9NQ39 176 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 SLC35D1Q9NTN3 355 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 BET1LQ9NYM9 111 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 VAX2Q9UIW0 290 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.63
SMG6-203ENST00000536871 A0A087X0M5 115 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 A0A1B0GX30 115 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 B4DEV8 164 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
SMG6-203ENST00000536871 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
SMG6-203ENST00000536871 IL3RAP26951 378 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
SMG6-203ENST00000536871 HAGHQ16775 308 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 OR4A47Q6IF82 309 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 ETV3LQ6ZN32 361 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 OR4A5Q8NH83 315 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 TMEM68Q96MH6 324 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 RARRES2Q99969 163 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 NIPSNAP3BQ9BS92 247 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 PCGF1Q9BSM1 259 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 RFNGQ9Y644 331 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
SMG6-203ENST00000536871 A0A087WWC5 75 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 A0A1B0GV50 99 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 OR13C7P0DN81 318 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 RAB5AP20339 215 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 HOXA5P20719 270 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 GNG10P50151 68 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 PPOXP50336 477 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 LINC00205P59089 165 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 OR13D1Q8NGV5 346 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 VSTM2AQ8TAG5 236 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 ZCCHC14Q8WYQ9 949 aaKnown RBP11.13□□□□□ -0.63
SMG6-203ENST00000536871 LHX4Q969G2 390 aa11.13□□□□□ -0.63
SMG6-203ENST00000536871 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
SMG6-203ENST00000536871 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
SMG6-203ENST00000536871 CT45A6P0DMU7 189 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 CT45A5P0DMU8 189 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 CT45A7P0DMV0 189 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
SMG6-203ENST00000536871 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
SMG6-203ENST00000536871 ZNF137PP52743 207 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 RAB31Q13636 194 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 SSX2Q16385 188 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 FFAR4Q5NUL3 377 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 MUC15Q8N387 334 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 OR10G9Q8NGN4 311 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 OR10G7Q8NGN6 311 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 RAB1CQ92928 201 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 APC2O95996 2303 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 UPK2O00526 184 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 DVL1O14640 695 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 RBP4P02753 201 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 PAX1P15863 534 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 MC5RP33032 325 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 OPRK1P41145 380 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms