RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 WDR86Q86TI4 376 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 HOGA1Q86XE5 327 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 OR1L1Q8NH94 360 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 AQP3Q92482 292 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 C1orf147Q96MC9 270 aaPredicted RBP6.92□□□□□ -1.3
ABCA4-207ENST00000536513 PCGF1Q9BSM1 259 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 ABHD14AQ9BUJ0 271 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 PRDM13Q9H4Q3 707 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 PSG11Q9UQ72 335 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 A0A1W2PN81 502 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 PSPNO60542 156 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 KRASP01116 189 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 DANCRP0C864 163 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 APELAP0DMC3 54 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 FAM78BQ5VT40 261 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 FAM166AQ6J272 317 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 Q6ZN92 141 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 DNAJC4Q9NNZ3 241 aa6.92□□□□□ -1.3
ABCA4-207ENST00000536513 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
ABCA4-207ENST00000536513 PPIHO43447 177 aaKnown RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 IGHV2-5P01817 119 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 GAPDHP04406 335 aaKnown RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ARL3P36405 182 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 CCL20P78556 96 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 PNLIPRP3Q17RR3 467 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 BSXQ3C1V8 233 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 SPANXN5Q5MJ07 72 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 SIGLECL1Q8N7X8 197 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 IGFBPL1Q8WX77 278 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 GALNT14Q96FL9 552 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 C2orf88Q9BSF0 95 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 VCX2Q9H322 139 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 TMED3Q9Y3Q3 217 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 COL5A1P20908 1838 aaPredicted RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 OR5B21A6NL26 309 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 M0QZK8 103 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 GGCTO75223 188 aaKnown RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 PMCHP20382 165 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 COL8A1P27658 744 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 GAPTQ8N292 157 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 OR2T10Q8NGZ9 312 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 CIB3Q96Q77 187 aaPredicted RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 CXXC4Q9H2H0 198 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ZNF665Q9H7R5 613 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 PRRC2AP48634 2157 aaKnown RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 MDFIC2A0A1B0GVS7 189 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 MARCH11A6NNE9 402 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 CLDN1O95832 211 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ZNF735P0CB33 412 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 EGR1P18146 543 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 CCL1P22362 96 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 DYNLT3P51808 116 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 EWSR1Q01844 656 aaKnown RBP eCLIP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ZNF90Q03938 601 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 TMEM267Q0VDI3 215 aaPredicted RBP6.91□□□□□ -1.3
ABCA4-207ENST00000536513 TMEM183BQ1AE95 376 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 SMIM21Q3B7S5 101 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 PLPPR1Q8TBJ4 325 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ARV1Q9H2C2 271 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 PLEKHF2Q9H8W4 249 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 GCM1Q9NP62 436 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 ZNRD1Q9P1U0 126 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 RFNGQ9Y644 331 aa6.91□□□□□ -1.3
ABCA4-207ENST00000536513 A0A1W2PPV4 95 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 H0Y8G0 127 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 NDUFS7O75251 213 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 FGF12P61328 243 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 ACOT6Q3I5F7 207 aaPredicted RBP6.9□□□□□ -1.3
ABCA4-207ENST00000536513 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 FOXL2NBQ6ZUU3 175 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 ZDHHC16Q969W1 377 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 POLR3KQ9Y2Y1 108 aaPredicted RBP6.9□□□□□ -1.3
ABCA4-207ENST00000536513 DEDDO75618 318 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
ABCA4-207ENST00000536513 OR10J1P30954 320 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 PRDX2P32119 198 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 CCKARP32238 428 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
ABCA4-207ENST00000536513 ELOBQ15370 118 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 POC1AQ8NBT0 407 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 CMTM2Q8TAZ6 248 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 KIAA1456Q9P272 454 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 NAGKQ9UJ70 344 aa6.9□□□□□ -1.3
ABCA4-207ENST00000536513 ENSAO43768 121 aaKnown RBP6.9□□□□□ -1.31
ABCA4-207ENST00000536513 GCGP01275 180 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 CD33P20138 364 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 KITLGP21583 273 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 COX7A1P24310 79 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 TIMP3P35625 211 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 PMELP40967 661 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 QRFPP83859 136 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 JOSD1Q15040 202 aaPredicted RBP6.9□□□□□ -1.31
ABCA4-207ENST00000536513 C16orf82Q7Z2V1 217 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 ST6GALNAC3Q8NDV1 305 aa6.9□□□□□ -1.31
ABCA4-207ENST00000536513 BORCS7Q96B45 105 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms