RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 BSPH1Q075Z2 132 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 ACP7Q6ZNF0 438 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 OR13C6PQ8NH95 151 aa15.45■□□□□ 0.06
SFSWAP-203ENST00000535236 GCM2O75603 506 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 TRGC2P03986 189 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 CD69Q07108 199 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 OR10AG1Q8NH19 301 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 C5orf66Q9H5L9 145 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 C1QTNF12Q5T7M4 302 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 OR4A47Q6IF82 309 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 AQP10Q96PS8 301 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 PLXNB2O15031 1838 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 TRBV20OR9-2A0A075B6H5 130 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 IGHV3-66A0A0C4DH42 116 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 C7orf71A4D174 169 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 IGKV1D-33P01593 117 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 IGKV1-33P01594 117 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 FBXL7Q9UJT9 491 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 LAMB2P55268 1798 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 TMEM187Q14656 261 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 GCSAMLQ5JQS6 135 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 COL5A1-AS1Q5SY13 56 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 CYP2G1PQ6ZSU1 146 aa15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 ELF5Q9UKW6 265 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-203ENST00000535236 UCP3P55916 312 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 OR4D5Q8NGN0 318 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 FBXL15Q9H469 300 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 IGHV3-49A0A0A0MS15 119 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 H7C1H1 209 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 RTN4RL2Q86UN3 420 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 ZNF418Q8TF45 676 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 GATAD1Q8WUU5 269 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 C7orf69Q9H7B7 122 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 PPP1R27Q86WC6 154 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 TNFRSF18Q9Y5U5 241 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 CHCHD2Q9Y6H1 151 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 ARID1AO14497 2285 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 NPIPB13A6NJU9 1138 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 NPIPB4C9JG80 1138 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 AGAP20933 346 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 TM4SF5O14894 197 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 PIN1P1O15428 100 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 TGFAP01135 160 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 SRIP30626 198 aa15.43■□□□□ 0.06
SFSWAP-203ENST00000535236 OR10S1Q8NGN2 331 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 EIF3GO75821 320 aaKnown RBP eCLIP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 JOSD1Q15040 202 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 OSR1Q8TAX0 266 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 GAGE10A6NGK3 116 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 C1orf162Q8NEQ5 155 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 ALKBH7Q9BT30 221 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 ADAMTSL1Q8N6G6 1762 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 NINQ8N4C6 2090 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 EFEMP2O95967 443 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 GCHFRP30047 84 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 HINT1P49773 126 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 ICAM4Q14773 271 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 ABLIM2Q6H8Q1 611 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 DUX3Q96PT4 197 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 RARRES2Q99969 163 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 PARLQ9H300 379 aa15.42■□□□□ 0.06
SFSWAP-203ENST00000535236 H0YL77 283 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 FOLR2P14207 255 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 ASPHD2Q6ICH7 369 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 OR1P1Q8NH06 330 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 S4R3C0 116 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 TMEM14DPA8MWL7 114 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 OTX1P32242 354 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 ASIPP42127 132 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 C12orf54Q6X4T0 127 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 RRHO14718 337 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 SH3BGRL3Q9H299 93 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 A0A1W2PRX2 142 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 EGR4Q05215 589 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 ZNF660Q6AZW8 331 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 NPDC1Q9NQX5 325 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 FAM216BQ8N7L0 139 aa15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 FOXA2Q9Y261 457 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-203ENST00000535236 TRIP12Q14669 1992 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 APC2O95996 2303 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 KIAA1217Q5T5P2 1943 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 HLA-DRB1P01911 266 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 LINC01590Q5TEZ4 76 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 NPIPB9F8W1W9 429 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 NPIPB7O75200 414 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 CA7P43166 264 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 RND3P61587 244 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 APCDD1LQ8NCL9 501 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 ARPC1AQ92747 370 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 TGIF2-C20orf24A0A0A6YYL0 155 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 IGHV2OR16-5A0A0B4J2B6 119 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 FAM201AQ5SY85 155 aa15.4■□□□□ 0.06
SFSWAP-203ENST00000535236 IL6RP08887 468 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 IFI27L2Q9H2X8 130 aa15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 F11RQ9Y624 299 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 K7ERU9 68 aa15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 TCF21O43680 179 aa15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 DNAL4O96015 105 aa15.39■□□□□ 0.05
SFSWAP-203ENST00000535236 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms