RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CYYR1Q96J86 154 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 ZMAT4Q9H898 229 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 IFT46Q9NQC8 304 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 FKBP11Q9NYL4 201 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 DNAH3Q8TD57 4116 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 TBPP20226 339 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 HERV-K104P61576 105 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 RPEL1Q2QD12 228 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 MZT2AQ6P582 158 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 OR5T1Q8NG75 326 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 SLC5A7Q9GZV3 580 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 A3GALT2U3KPV4 340 aa7.96□□□□□ -1.13
CSDE1-217ENST00000534699 TRAV25A0A0B4J276 109 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 GGCTO75223 188 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 B3GALNT1O75752 331 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 PTBP1P26599 531 aaKnown RBP eCLIP7.96□□□□□ -1.144e-9■■■■■ 37.3
CSDE1-217ENST00000534699 FCGR2CP31995 323 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 RPL8P62917 257 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 OR13F1Q8NGS4 319 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 VN1R17PQ8TDU5 208 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 SLC25A46Q96AG3 418 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 EEF1AKMT3Q96AZ1 226 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 MOB3AQ96BX8 217 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 PRR25Q96S07 402 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 PALMDQ9NP74 551 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 GAR1Q9NY12 217 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 LOC100506127A0A0U1RQW1 187 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 SPNP16150 400 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 HLA-GP17693 338 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 NFYAP23511 347 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 RCVRNP35243 200 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 SSBP1Q04837 148 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 EXOSC2Q13868 293 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 NEDD8Q15843 81 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 OR5H6Q8NGV6 325 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 AP3S1Q92572 193 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 MS4A10Q96PG2 267 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 BCL7BQ9BQE9 202 aa7.96□□□□□ -1.14
CSDE1-217ENST00000534699 FAM103A1Q9BTL3 118 aaKnown RBP7.96□□□□□ -1.14
CSDE1-217ENST00000534699 DPPA5A6NC42 116 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 UPK2O00526 184 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 CSN3P07498 182 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 PRSS3P35030 304 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 ERVK-16P61578 105 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 RHOGP84095 191 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 CMTM1Q8IZ96 169 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 MAFIPQ8WZ33 124 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF486Q96H40 463 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-217ENST00000534699 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 IGKV1D-13A0A0B4J2D9 117 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 A8MWP6 167 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 TEX22C9J3V5 150 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 LY86O95711 162 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 IGKV1-13P0DP09 117 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 CTRB1P17538 263 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 RPL30P62888 115 aaKnown RBP7.95□□□□□ -1.14
CSDE1-217ENST00000534699 TMEM69Q5SWH9 247 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 CTRB2Q6GPI1 263 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 OR5H2Q8NGV7 314 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 AKIP1Q9NQ31 210 aa7.95□□□□□ -1.14
CSDE1-217ENST00000534699 PJVKQ0ZLH3 352 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 FAM106AQ4KMX7 169 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 IL34Q6ZMJ4 242 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 SPAG16Q8N0X2 631 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 IL17DQ8TAD2 202 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 OR5B12Q96R08 314 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 ZC4H2Q9NQZ6 224 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 GPR31O00270 319 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 ATG12O94817 140 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 IGHV3-11P01762 117 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 CLEC2LP0C7M8 214 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 RPA2P15927 270 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 F2RP25116 425 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 TAS2R20P59543 309 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 MXD1Q05195 221 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 GTSCR1Q86UQ5 136 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 GPX8Q8TED1 209 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-217ENST00000534699 CACFD1Q9UGQ2 172 aa7.94□□□□□ -1.14
CSDE1-217ENST00000534699 RND3P61587 244 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 MRPS10P82664 201 aaKnown RBP7.93□□□□□ -1.14
CSDE1-217ENST00000534699 SPSB3Q6PJ21 355 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 OR6F1Q8NGZ6 308 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 SECTM1Q8WVN6 248 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 THAP7Q9BT49 309 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-217ENST00000534699 CCL28Q9NRJ3 127 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 PRNDQ9UKY0 176 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 RPS19P39019 145 aaKnown RBP7.93□□□□□ -1.14
CSDE1-217ENST00000534699 RORCP51449 518 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-217ENST00000534699 LINC00205P59089 165 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF45Q02386 682 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 TMEM17Q86X19 198 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 Q8N1Y9 231 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms