RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	IZUMO1R	A6ND01	250 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	C17orf98	A8MV24	154 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	MIF4GD	A9UHW6	222 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442		L7N2F9	121 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	PLPP3	O14495	311 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	NUPL2	O15504	423 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	RBP4	P02753	201 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GYPC	P04921	128 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CST2	P09228	141 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	OR5H8	P0DN80	308 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CCL3L1	P16619	93 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	IGFBP3	P17936	291 aa	Predicted RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ANP32A	P39687	249 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CXCL5	P42830	114 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HIST3H3	Q16695	136 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	KRT71	Q3SY84	523 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	C2orf83	Q53S99	150 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	C10orf128	Q5T292	105 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	AGBL2	Q5U5Z8	902 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	LCN8	Q6JVE9	175 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	NANOGP8	Q6NSW7	305 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	TEX43	Q6ZNM6	134 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ZNF493	Q6ZR52	646 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HMGN2P46	Q86SG4	172 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	C8orf31	Q8N9H6	132 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442		Q8N9W7	124 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	OR2K2	Q8NGT1	345 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	OR10J6P	Q8NGY7	276 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SFXN5	Q8TD22	340 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CD300LF	Q8TDQ1	290 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	APOBEC3D	Q96AK3	386 aa	Predicted RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	FAM3D	Q96BQ1	224 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	FLYWCH2	Q96CP2	140 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	RCN3	Q96D15	328 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SEH1L	Q96EE3	360 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	BCL7B	Q9BQE9	202 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	WFDC6	Q9BQY6	131 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HDHD3	Q9BSH5	251 aa	Predicted RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ADAT1	Q9BUB4	502 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	DPY30	Q9C005	99 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	TXNIP	Q9H3M7	391 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	MRPL22	Q9NWU5	206 aa	Known RBP	2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ANAPC11	Q9NYG5	84 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	PCTP	Q9UKL6	214 aa		2.81	□□□□□ -1.96
ECHDC1-223	ENST00000534442	EXOC1L	A0A1B0GW35	172 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	LYRM9	A8MSI8	78 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SMKR1	H3BMG3	65 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442		K7EMT4	169 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	POLR3G	O15318	223 aa	Predicted RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	FKBP6	O75344	327 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HLA-DMB	P28068	263 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	MAS1L	P35410	378 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GUCA1A	P43080	201 aa	Predicted RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ZNF133	P52736	654 aa	Predicted RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	KRTAP10-7	P60409	375 aa	Predicted RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ESRRG	P62508	458 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HPCA	P84074	193 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	MRPL2	Q5T653	305 aa	Known RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SMARCD3	Q6STE5	483 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SLC16A13	Q7RTY0	426 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ANGPTL6	Q8NI99	470 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GIMAP1	Q8WWP7	306 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ROPN1L	Q96C74	230 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	KCTD7	Q96MP8	289 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GPR22	Q99680	433 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	TOLLIP	Q9H0E2	274 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	PEF1	Q9UBV8	284 aa	Known RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	PSG8	Q9UQ74	426 aa		2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	POLR3H	Q9Y535	204 aa	Predicted RBP	2.8	□□□□□ -1.96
ECHDC1-223	ENST00000534442	IGHV2-26	A0A0B4J1V2	119 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GMNC	A6NCL1	334 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GGT3P	A6NGU5	568 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	LEUTX	A8MZ59	168 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CENPBD1	B2RD01	187 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SGCE	O43556	437 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	BANF1	O75531	89 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	TFF1	P04155	84 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	LGALS1	P09382	135 aa	Known RBP	2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	UBC	P0CG48	685 aa	Known RBP	2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CT45A6	P0DMU7	189 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CT45A5	P0DMU8	189 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CT45A7	P0DMV0	189 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	NR2C1	P13056	603 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	GABRA2	P47869	451 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CCR6	P51684	374 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	ZNF138	P52744	262 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	DLX6	P56179	175 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	UBE2M	P61081	183 aa	Known RBP	2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	APOF	Q13790	326 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	SPCS2	Q15005	226 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	POU2AF1	Q16633	256 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	FAM83E	Q2M2I3	478 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	CT45A1	Q5HYN5	189 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	LCE1E	Q5T753	118 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	PLCXD3	Q63HM9	321 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	WDR82	Q6UXN9	313 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	HDDC2	Q7Z4H3	204 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	OAF	Q86UD1	273 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	JAGN1	Q8N5M9	183 aa		2.79	□□□□□ -1.96
ECHDC1-223	ENST00000534442	NOXO1	Q8NFA2	376 aa		2.79	□□□□□ -1.96

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