RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CLEC7AQ9BXN2 247 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 ZNF503-AS2A6NEH8 195 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 IAPPP10997 89 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 ARF1P84077 181 aaKnown RBP16.06■□□□□ 0.16
SMPD1-210ENST00000534405 Q5PR19 223 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 BVES-AS1Q5T3Y7 98 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 SAMD13Q5VXD3 122 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 COLCA1Q6ZS62 124 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 HES7Q9BYE0 225 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 PRDM14Q9GZV8 571 aa16.06■□□□□ 0.16
SMPD1-210ENST00000534405 SMPD2O60906 423 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 IGLC1P0CG04 106 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 CCNOP22674 350 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 CFAP161Q6P656 301 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 S100A7AQ86SG5 101 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 OR10P1Q8NGE3 313 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 TMEM186Q96B77 213 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 KCNIP2Q9NS61 270 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 MRPL33O75394 65 aaKnown RBP16.05■□□□□ 0.16
SMPD1-210ENST00000534405 BCL3P20749 454 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 NEUROG1Q92886 237 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 TMEM45BQ96B21 275 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 IL36RNQ9UBH0 155 aa16.05■□□□□ 0.16
SMPD1-210ENST00000534405 PIGBOS1A0A0B4J2F0 54 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 SCGB1A1P11684 91 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 ZNF324BQ6AW86 544 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-210ENST00000534405 LCN12Q6JVE5 192 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 PET117Q6UWS5 81 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 PRRG4Q9BZD6 226 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 TRBV20OR9-2A0A075B6H5 130 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 NEURL1O76050 574 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 CRYAAP02489 173 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 MT-ND6P03923 174 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 ACP1P24666 158 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 ZXDAP98168 799 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 SLC38A11Q08AI6 406 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 TRIP6Q15654 476 aaKnown RBP16.04■□□□□ 0.16
SMPD1-210ENST00000534405 TMEM108Q6UXF1 575 aa16.04■□□□□ 0.16
SMPD1-210ENST00000534405 TUSC5Q8IXB3 177 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 FAM58AQ8N1B3 248 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 TSKUQ8WUA8 353 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 WASHC3Q9Y3C0 194 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 ZNF407Q9C0G0 2248 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 IGKV3D-15A0A087WSY6 115 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 SLC22A20A6NK97 555 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 FRMD6-AS1P0C7T7 363 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 ATP5G3P48201 142 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 RELBQ01201 579 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 Q6ZRM9 215 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 APOBEC3DQ96AK3 386 aaPredicted RBP16.03■□□□□ 0.16
SMPD1-210ENST00000534405 QTRT1Q9BXR0 403 aaKnown RBP16.03■□□□□ 0.16
SMPD1-210ENST00000534405 STRADBQ9C0K7 418 aa16.03■□□□□ 0.16
SMPD1-210ENST00000534405 IGKV1D-13A0A0B4J2D9 117 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 CD5LO43866 347 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 IGKV1-13P0DP09 117 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 SPINK2P20155 84 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 COX5AP20674 150 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 GPM6AP51674 278 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 IGFBP7Q16270 282 aa16.02■□□□□ 0.16
SMPD1-210ENST00000534405 DNAJC13O75165 2243 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 C5orf49A4QMS7 147 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 M0R1X1 148 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 Q6ZS49 121 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 C1orf210Q8IVY1 113 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 CCL28Q9NRJ3 127 aa16.02■□□□□ 0.15
SMPD1-210ENST00000534405 PEF1Q9UBV8 284 aaKnown RBP16.02■□□□□ 0.15
SMPD1-210ENST00000534405 BOKQ9UMX3 212 aaPredicted RBP16.02■□□□□ 0.15
SMPD1-210ENST00000534405 DOCK7Q96N67 2140 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 TRAV8-6A0A0B4J262 113 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 C3orf80F5H4A9 247 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 SCTP09683 121 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 PPIAL4GP0DN37 164 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 THBS3P49746 956 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 PSG3Q16557 428 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 NRN1LQ496H8 165 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 WDR73Q6P4I2 378 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 SPRY4Q9C004 299 aa16.01■□□□□ 0.15
SMPD1-210ENST00000534405 HSPB6O14558 160 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 PGLYRP1O75594 196 aaPredicted RBP16■□□□□ 0.15
SMPD1-210ENST00000534405 NUDT3O95989 172 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 NGFP01138 241 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 C12orf54Q6X4T0 127 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 FAM19A2Q8N3H0 131 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 ST6GALNAC3Q8NDV1 305 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 OR1B1Q8NGR6 318 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 OCC1Q8TAD7 63 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 MTCH1Q9NZJ7 389 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 MUC21A0A0G2JKD1 596 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 MUC21A0A140T8X8 626 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 A0A1W2PR80 420 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 TUSC2O75896 110 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 F2RP25116 425 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 PMP22Q01453 160 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 TBR1Q16650 682 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 IZUMO4Q1ZYL8 232 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 TMEM249Q2WGJ8 235 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 MUC21Q5SSG8 566 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 LINC00470Q9BZP3 86 aa16■□□□□ 0.15
SMPD1-210ENST00000534405 CACNG5Q9UF02 275 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms