RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 LINC00587B1AMM8 73 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 FAM90A26D6RGX4 464 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 WNT9BO14905 357 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 ZIC4Q8N9L1 334 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 HIST1H4GQ99525 98 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 AURKAIP1Q9NWT8 199 aaPredicted RBP14.63□□□□□ -0.07
PHRF1-206ENST00000534320 C10orf126Q8N4M7 172 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 MDC1Q14676 2089 aaKnown RBP14.63□□□□□ -0.07
PHRF1-206ENST00000534320 GFRA3O60609 400 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 HIST1H1BP16401 226 aaKnown RBP14.63□□□□□ -0.07
PHRF1-206ENST00000534320 TMEM183AQ8IXX5 376 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 IDI2-AS1Q9NZ38 188 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 C1RLQ9NZP8 487 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 TUBD1Q9UJT1 453 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 A8MWL6 223 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 GLRXP35754 106 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 ZNF137PP52743 207 aa14.63□□□□□ -0.07
PHRF1-206ENST00000534320 FHITP49789 147 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 DRAM1Q8N682 238 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 NPVFQ9HCQ7 196 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 FREM3P0C091 2139 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 SIGLEC5O15389 551 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 ZNF502Q8TBZ5 544 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 LSM10Q969L4 123 aaKnown RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 ALKBH7Q9BT30 221 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 MED12Q93074 2177 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 RTBDNQ9BSG5 229 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 APELAP0DMC3 54 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 TWIST1Q15672 202 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 LAMTOR1Q6IAA8 161 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 OR4X1Q8NH49 305 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 FOXD3Q9UJU5 478 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 GPR6P46095 362 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 HERPUD1Q15011 391 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 MMDQ15546 238 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 MRPL18Q9H0U6 180 aaKnown RBP14.62□□□□□ -0.07
PHRF1-206ENST00000534320 VCX2Q9H322 139 aa14.62□□□□□ -0.07
PHRF1-206ENST00000534320 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 SSTR5P35346 364 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 MEF2BQ02080 365 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-206ENST00000534320 IZUMO4Q1ZYL8 232 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 WBP1Q96G27 269 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 GNG7O60262 68 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 TSPAN13O95857 204 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 TNFRSF9Q07011 255 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 PSG7Q13046 419 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 PAQR4Q8N4S7 273 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-206ENST00000534320 ASCL3Q9NQ33 180 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 ELOVL5Q9NYP7 299 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 MARCH11A6NNE9 402 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 IFNL4K9M1U5 179 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 F2RL2O00254 374 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 S1PR2O95136 353 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 SMIM13P0DJ93 91 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 ACSF3Q4G176 576 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-206ENST00000534320 C10orf113Q5VZT2 155 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 ACP7Q6ZNF0 438 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 C9orf106Q8NAJ2 232 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 NDUFA2O43678 99 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 CELA3BP08861 270 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 FAM27E3Q08E93 113 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 GRAMD2BQ96HH9 432 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 COA4Q9NYJ1 87 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 NOTCH4Q99466 2003 aa14.61□□□□□ -0.07
PHRF1-206ENST00000534320 GBF1Q92538 1859 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 MC5RP33032 325 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 GALNT14Q96FL9 552 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 LGALS7P47929 136 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 GGNQ86UU5 652 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 TAF15Q92804 592 aaKnown RBP eCLIP14.6□□□□□ -0.076e-6■■□□□ 12.5
PHRF1-206ENST00000534320 RNF115Q9Y4L5 304 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 PLXNA4Q9HCM2 1894 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 SLC17A3O00476 420 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 MPDU1O75352 247 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 GOSR1O95249 250 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 ZNF841Q6ZN19 808 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 BMPERQ8N8U9 685 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 LEAP2Q969E1 77 aa14.6□□□□□ -0.07
PHRF1-206ENST00000534320 IGHV2OR16-5A0A0B4J2B6 119 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 KLRB1Q12918 225 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 MUC15Q8N387 334 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 PLSCR2Q9NRY7 297 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 CLDN16Q9Y5I7 305 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 H7C2G1 150 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 PXMP4Q9Y6I8 212 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 LIPFP07098 398 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 CCDC144NLQ6NUI1 221 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 ZNRF1Q8ND25 227 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 TICRRQ7Z2Z1 1910 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 CRYGSP22914 178 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 FAM89BQ8N5H3 189 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 SNRNP40Q96DI7 357 aaKnown RBP14.59□□□□□ -0.07
PHRF1-206ENST00000534320 IL36RNQ9UBH0 155 aa14.59□□□□□ -0.07
PHRF1-206ENST00000534320 SS18L1O75177 396 aaPredicted RBP14.58□□□□□ -0.07
PHRF1-206ENST00000534320 IL4P05112 153 aa14.58□□□□□ -0.07
PHRF1-206ENST00000534320 FGFBP3Q8TAT2 258 aa14.58□□□□□ -0.07
PHRF1-206ENST00000534320 NABP1Q96AH0 204 aa14.58□□□□□ -0.07
PHRF1-206ENST00000534320 MIEN1Q9BRT3 115 aa14.58□□□□□ -0.07
PHRF1-206ENST00000534320 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms