RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ALOX12BO75342 701 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 CDRT1O95170 752 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ORM1P02763 201 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 MAS1P04201 325 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 FGF1P05230 155 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 MMP7P09237 267 aaPredicted RBP2.71□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H1EP10412 219 aaKnown RBP2.71□□□□□ -1.97
CSMD3-210ENST00000534172 TPT1P13693 172 aaKnown RBP2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ATF1P18846 271 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ATP6V0CP27449 155 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 TAS2R19P59542 299 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 OR1Q1Q15612 314 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 CCL15Q16663 113 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 HIGD2BQ4VC39 106 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 TRMT12Q53H54 448 aaKnown RBP2.71□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM91Q6ZNR0 172 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 NEGR1Q7Z3B1 354 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 LFNGQ8NES3 379 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 OR10G4Q8NGN3 311 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 NEIL3Q8TAT5 605 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 SFXN5Q8TD22 340 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 HAVCR2Q8TDQ0 301 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 DCUN1D4Q92564 292 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 PTX4Q96A99 478 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 EEF1AKMT3Q96AZ1 226 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 BTF3L4Q96K17 158 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 KCTD7Q96MP8 289 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 P2RX4Q99571 388 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 RARRES2Q99969 163 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF471Q9BX82 626 aaPredicted RBP2.71□□□□□ -1.97
CSMD3-210ENST00000534172 GTSF1LQ9H1H1 148 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 SMDT1Q9H4I9 107 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 MED29Q9NX70 200 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 KLK13Q9UKR3 277 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF236Q9UL36 1845 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 BRCA2P51587 3418 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 MYO9AB2RTY4 2548 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 LOC102724200A0A096LPH7 203 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 A0A0B4J2A0 478 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 A0A0G2JMM0 328 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 LOC285095A0A1B0GVY8 99 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1W2PPB8 328 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 KIR3DP1A8MWS1 328 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 FAM220BPB1ANY3 271 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 F5H5T6 163 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 F5H768 121 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 C15orf65H3BRN8 121 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 K7ENP7 123 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 APOC4-APOC2K7ER74 178 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SAP18O00422 153 aaKnown RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 PLPP3O14495 311 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 GNGT2O14610 69 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF207O43670 478 aaKnown RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 MPZL2O60487 215 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 KLF8O95600 359 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A4P12235 298 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 PIPP12273 146 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 USF1P22415 310 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 CDKN2BP42772 138 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 RPS25P62851 125 aaKnown RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM267Q0VDI3 215 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF266Q14584 549 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 RGNQ15493 299 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 TGIF1Q15583 401 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ATP6AP1LQ52LC2 224 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SPANXN3Q5MJ09 141 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 C12orf54Q6X4T0 127 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 GKN2Q86XP6 184 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 TOMM5Q8N4H5 51 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 COX18Q8N8Q8 333 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 DOK4Q8TEW6 326 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 PSMF1Q92530 271 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 RAB8BQ92930 207 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 IL22RA2Q969J5 263 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 FGGYQ96C11 551 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SEC22AQ96IW7 307 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ADTRPQ96IZ2 230 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF488Q96MN9 340 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 IMMP2LQ96T52 175 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 GINS3Q9BRX5 216 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 OR11A1Q9GZK7 315 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM126AQ9H061 195 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SPANXCQ9NY87 97 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 TAS2R5Q9NYW4 299 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 Q9UF83 564 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SLC23A2Q9UGH3 650 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SHPKQ9UHJ6 478 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF107Q9UII5 783 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 BOKQ9UMX3 212 aaPredicted RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SIGLEC7Q9Y286 467 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ASF1AQ9Y294 204 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 SIGLEC9Q9Y336 463 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 RIF1Q5UIP0 2472 aaKnown RBP2.71□□□□□ -1.98
CSMD3-210ENST00000534172 MYO16Q9Y6X6 1858 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 CACNA1FO60840 1977 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 DOCK2Q92608 1830 aa2.71□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF705FA8MVS1 300 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 J3QLI3 93 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 K7EPK0 472 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms