RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SCGB2A2Q13296 93 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 NRN1LQ496H8 165 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 PARLQ9H300 379 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 RNF115Q9Y4L5 304 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 ARL2-SNX15V9GYD0 113 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 LAMA2P24043 3122 aaKnown RBP10.45□□□□□ -0.74
RAD50-209ENST00000533482 SNURFLB1AK76 121 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 FGF16O43320 207 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 TFF3Q07654 80 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 LY6DQ14210 128 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
RAD50-209ENST00000533482 ZNF785A8K8V0 405 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 H3BTX0 84 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 PTBP3O95758 552 aaKnown RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 CSN3P07498 182 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 OTX1P32242 354 aaPredicted RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 RPEL1Q2QD12 228 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 SLC35E4Q6ICL7 350 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 ANAPC16Q96DE5 110 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 POM121Q96HA1 1249 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 ZDHHC8Q9ULC8 765 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 C5orf42Q9H799 3197 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 PDE6DO43924 150 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 CSRP1P21291 193 aaKnown RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 IQCJQ1A5X6 159 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 SPACA3Q8IXA5 215 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 PROK2Q9HC23 129 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 NTF4P34130 210 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 KIR2DL2P43627 348 aaPredicted RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 COA4Q9NYJ1 87 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 A0A087X0M5 115 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 A0A1B0GX30 115 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 G0S2P27469 103 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 HOXA4Q00056 320 aaPredicted RBP10.44□□□□□ -0.74
RAD50-209ENST00000533482 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
RAD50-209ENST00000533482 IGKV3D-15A0A087WSY6 115 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 TRBV23-1A0A0A0MS06 115 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 FAM90A26D6RGX4 464 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 LINC00869P0C866 280 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 CCL3L1P16619 93 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 ASCL3Q9NQ33 180 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 GNG7O60262 68 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 PSPNO60542 156 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 LINC00205P59089 165 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 ID3Q02535 119 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 SSX7Q7RTT5 188 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 FAM57AQ8TBR7 257 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 VAMP8Q9BV40 100 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 IL19Q9UHD0 177 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 IGHV3OR16-10A0A075B7F0 116 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 OR1L6Q8NGR2 347 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 MRPL37Q9BZE1 423 aaKnown RBP10.43□□□□□ -0.74
RAD50-209ENST00000533482 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
RAD50-209ENST00000533482 YLPM1P49750 1951 aaKnown RBP10.43□□□□□ -0.74
RAD50-209ENST00000533482 IGHV1-69-2A0A0G2JMI3 117 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 TRGC1P0CF51 173 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 OR4F17Q8NGA8 305 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 TMEM171Q8WVE6 324 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 LOC102723971A0A1B0GUV8 181 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 WIPF3A6NGB9 483 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 RRHO14718 337 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 SLC31A2O15432 143 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 ZNF525Q8N782 197 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 FAM222BQ8WU58 562 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 NOL4LQ96MY1 436 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 JPT1Q9UK76 154 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 NCOA6Q14686 2063 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 IGHV1-18A0A0C4DH31 117 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 F2RL2O00254 374 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 FXYD3Q14802 87 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 RSPO1Q2MKA7 263 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 C1orf174Q8IYL3 243 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 MDS2Q8NDY4 140 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 EAF1Q96JC9 268 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 AMMECR1Q9Y4X0 333 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 GATA2P23769 480 aaPredicted RBP10.42□□□□□ -0.74
RAD50-209ENST00000533482 RND2P52198 227 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 WDR82Q6UXN9 313 aa10.42□□□□□ -0.74
RAD50-209ENST00000533482 RPRMLQ8N4K4 120 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms