RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 DRAXINQ8NBI3 349 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 OR11H7Q8NGC8 314 aa8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 S1PR3Q99500 378 aa8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 HSD17B10Q99714 261 aaKnown RBP8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 CLEC7AQ9BXN2 247 aa8.93□□□□□ -0.98
TRAPPC4-213ENST00000533149 SAA2-SAA4A0A096LPE2 208 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 LINC00473A8K010 186 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 H0Y980 276 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 B3GALNT1O75752 331 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 CCNKO75909 580 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 SIX6O95475 246 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 IGLV1-47P01700 117 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 SERPINE2P07093 398 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 SAA2P0DJI9 122 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 CXCL3P19876 107 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 DUTP33316 252 aaKnown RBP8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 LPAR6P43657 344 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 THBS3P49746 956 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 DYNLT3P51808 116 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 CATR1Q13166 79 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 LGI3Q8N145 548 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 OR11H6Q8NGC7 330 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 TCTEX1D2Q8WW35 142 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 MALSU1Q96EH3 234 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 TMEM222Q9H0R3 208 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
TRAPPC4-213ENST00000533149 DBX1A6NMT0 343 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 GOSR2O14653 212 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 CDS2O95674 445 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 HOXB5P09067 269 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 CT45A6P0DMU7 189 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 CT45A5P0DMU8 189 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 CT45A7P0DMV0 189 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 HLA-GP17693 338 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 UCP1P25874 307 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 IL3RAP26951 378 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 SRPXP78539 464 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 HLA-DRB5Q30154 266 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ADAMTSL5Q6ZMM2 481 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ETV3LQ6ZN32 361 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF833PQ6ZTB9 187 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 LHFPL4Q7Z7J7 247 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF695Q8IW36 515 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 SELENOHQ8IZQ5 122 aaKnown RBP8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 TCTEX1D1Q8N7M0 179 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 LRTM2Q8N967 370 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ST6GALNAC6Q969X2 333 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 ST6GAL2Q96JF0 529 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 TMEM56Q96MV1 263 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 CITED4Q96RK1 184 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 PRR25Q96S07 402 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 LIN7CQ9NUP9 197 aaKnown RBP8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 TBL2Q9Y4P3 447 aaKnown RBP8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 TMEM56-RWDD3S4R434 201 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 DSCAML1Q8TD84 2053 aa8.91□□□□□ -0.98
TRAPPC4-213ENST00000533149 C13orf42A0A1B0GVH6 325 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 FAM25EA8MYX2 175 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 LY6LH3BQJ8 138 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 BUB1B-PAK6H3BSN5 160 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 CCSO14618 274 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 FCGR3BO75015 233 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ADAP1O75689 374 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 JTBO76095 146 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ARG1P05089 322 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 MYCNOSP40205 109 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF137PP52743 207 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 CD300CQ08708 224 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 DIAPH2-AS1Q14236 149 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 SSX2Q16385 188 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 OR2B11Q5JQS5 317 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 TMEM268Q5VZI3 342 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 LYZL2Q7Z4W2 148 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 SPAG16Q8N0X2 631 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 DYNAPQ8N1N2 210 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF383Q8NA42 475 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 OR4P4Q8NGL7 312 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 WDR89Q96FK6 387 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ADTRPQ96IZ2 230 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 ZNF436Q9C0F3 470 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 PRELID3BQ9Y3B1 194 aa8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 AMMECR1Q9Y4X0 333 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC4-213ENST00000533149 C5orf51A6NDU8 294 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 ODF3BA8MYP8 253 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR2A4O95047 310 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 IFNA21P01568 189 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 IGKV1-39P01597 117 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 GAPDHP04406 335 aaKnown RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 IGKV1D-39P04432 117 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 HTR1DP28221 377 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 KIR2DS2P43631 304 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 REG1BP48304 166 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 ZNF816Q0VGE8 651 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 GGNBP1Q5YKI7 109 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 FAM71F2Q6NXP2 309 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 C16orf82Q7Z2V1 217 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms