RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 FAM3DQ96BQ1 224 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 OR2A7Q96R45 310 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 SPAG8Q99932 426 aaPredicted RBP8.62□□□□□ -1.03
CMTM1-216ENST00000533078 OR51E2Q9H255 320 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 THYN1Q9P016 225 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 MRPL27Q9P0M9 148 aaKnown RBP8.62□□□□□ -1.03
CMTM1-216ENST00000533078 RAB22AQ9UL26 194 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 AK6Q9Y3D8 172 aaKnown RBP8.62□□□□□ -1.03
CMTM1-216ENST00000533078 A0A075B6Q4 140 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 LINC00473A8K010 186 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 DEDDO75618 318 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 IFNA4P05014 189 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 CD37P11049 281 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 GALP22466 123 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 CRHBPP24387 322 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 PSMA1P25786 263 aaKnown RBP8.61□□□□□ -1.03
CMTM1-216ENST00000533078 ELLP55199 621 aaPredicted RBP8.61□□□□□ -1.03
CMTM1-216ENST00000533078 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 OR2B11Q5JQS5 317 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 PLAC9Q5JTB6 97 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 MFFQ9GZY8 342 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
CMTM1-216ENST00000533078 METTL21EPA6NDL7 271 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 TEX22C9J3V5 150 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 KBTBD11O94819 623 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 CLEC3BP05452 202 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 CTXN2P0C2S0 81 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
CMTM1-216ENST00000533078 PSMB6P28072 239 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 CLDN12P56749 244 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 ARL6IP1Q15041 203 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 C2orf76Q3KRA6 126 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 LIPKQ5VXJ0 399 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 PLET1Q6UQ28 207 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-216ENST00000533078 FBLIM1Q8WUP2 373 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 MAFIPQ8WZ33 124 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 TMEM203Q969S6 136 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 RNF183Q96D59 192 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 C5orf30Q96GV9 206 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 CCDC140Q96MF4 163 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 C5orf66Q9H5L9 145 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 DMRT1Q9Y5R6 373 aa8.6□□□□□ -1.03
CMTM1-216ENST00000533078 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 J3QRK9 145 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 TSPAN4O14817 238 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 HRASP01112 189 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 CRYGCP07315 174 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 HSMCR30P0CW71 290 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 GNB3P16520 340 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 GPR183P32249 361 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 EWSR1Q01844 656 aaKnown RBP eCLIP8.59□□□□□ -1.03
CMTM1-216ENST00000533078 VKORC1L1Q8N0U8 176 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 OR10R2Q8NGX6 335 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 GATAD1Q8WUU5 269 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 HSD17B10Q99714 261 aaKnown RBP8.59□□□□□ -1.03
CMTM1-216ENST00000533078 SCN3BQ9NY72 215 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 UBQLN2Q9UHD9 624 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 S4R3C0 116 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 V9GY05 133 aa8.59□□□□□ -1.03
CMTM1-216ENST00000533078 TMEM272A0A1B0GTI8 110 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 ZNF735P0CB33 412 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 HIST1H1DP16402 221 aaKnown RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 CTRB1P17538 263 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 TCTAP57738 103 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 RBMS2Q15434 407 aaKnown RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 HES5Q5TA89 166 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 CTRB2Q6GPI1 263 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 Q6ZS49 121 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 TMEM167AQ8TBQ9 72 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 VCXQ9H320 206 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 FBXL17Q9UF56 701 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 RBMX2Q9Y388 322 aaKnown RBP8.58□□□□□ -1.04
CMTM1-216ENST00000533078 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
CMTM1-216ENST00000533078 MFNGO00587 321 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 PDCD5O14737 125 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 REG1AP05451 166 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 GNAO1P09471 354 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 AREGP15514 252 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 HLA-GP17693 338 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 DTYMKP23919 212 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
CMTM1-216ENST00000533078 UNQ9165/PRO28630Q6UXU0 137 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 SSX9Q7RTT3 188 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 OR4A5Q8NH83 315 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 HRASLSQ9HDD0 168 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms