RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PXMP4Q9Y6I8 212 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 LOC400499M0QZD8 3231 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 A0A0U1RQK1 487 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 ZNF320A2RRD8 509 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 MPDU1O75352 247 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 AGFG2O95081 481 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 OR9G9P0C7N8 305 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 CECR9P0C854 216 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 SSTR5P35346 364 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 OR13A1Q8NGR1 328 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 TXNDC17Q9BRA2 123 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 CXXC4Q9H2H0 198 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 PSG11Q9UQ72 335 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 ZFHX4Q86UP3 3567 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 IGHV3-43A0A0B4J1X8 118 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 A0A1W2PPV4 95 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 FAM90A9PA6NNJ1 464 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 C1QTNF9P0C862 333 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 IGHV3-43DP0DP04 118 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 KITLGP21583 273 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 EDDM3BP56851 147 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 PAX5Q02548 391 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 DERL1Q9BUN8 251 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
UBXN1-213ENST00000532904 IFNL4K9M1U5 179 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 TFF1P04155 84 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 OR4A8P0C604 315 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 CEACAM8P31997 349 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-213ENST00000532904 OPRK1P41145 380 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 RPP30P78346 268 aaKnown RBP14.88□□□□□ -0.03
UBXN1-213ENST00000532904 HOXA4Q00056 320 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-213ENST00000532904 C3orf36Q3SXR2 165 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 SPACA3Q8IXA5 215 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 SCNM1Q9BWG6 230 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 SFXN3Q9BWM7 321 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 AKAP13Q12802 2813 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 BMP5P22003 454 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 HTD2P86397 168 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 WDR82Q6UXN9 313 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 ABHD17AQ96GS6 310 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 SFRP2Q96HF1 295 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 CHODLQ9H9P2 273 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 AURKAIP1Q9NWT8 199 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-213ENST00000532904 ELOVL5Q9NYP7 299 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
UBXN1-213ENST00000532904 IGHV2OR16-5A0A0B4J2B6 119 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 IGHV1-18A0A0C4DH31 117 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 DEFB108AA8MXU0 73 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 C15orf65H3BRN8 121 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 ADH4P08319 380 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 SELLP14151 372 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 SPCS3P61009 180 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 USF2Q15853 346 aaPredicted RBP14.87□□□□□ -0.03
UBXN1-213ENST00000532904 TIMM23BQ5SRD1 257 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 MBNL2Q5VZF2 373 aaKnown RBP14.87□□□□□ -0.03
UBXN1-213ENST00000532904 TRAT1Q6PIZ9 186 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 TPRX1Q8N7U7 411 aa14.87□□□□□ -0.03
UBXN1-213ENST00000532904 RBFOX2O43251 390 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 SPINT2O43291 252 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 STAG3L2P0CL84 134 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 STAG3L3P0CL85 134 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 DUTP33316 252 aaKnown RBP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 ZNF718Q3SXZ3 478 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 PRAMEF6Q5VXH4 476 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 TREML4Q6UXN2 200 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 RFESDQ8TAC1 157 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 PATZ1Q9HBE1 687 aaKnown RBP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 FKBP11Q9NYL4 201 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 USF3Q68DE3 2245 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 DIDO1Q9BTC0 2240 aaKnown RBP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 A0A1B0GWJ7 208 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 PRSS46E5RG02 174 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 HPRT1P00492 218 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 TMPRSS3P57727 454 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 RAB4BP61018 213 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 ZNF474Q6S9Z5 364 aaPredicted RBP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 OR52E5Q8NH55 327 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 SGMS2Q8NHU3 365 aa14.86□□□□□ -0.03
UBXN1-213ENST00000532904 PRRC2CQ9Y520 2896 aaKnown RBP14.86□□□□□ -0.03
UBXN1-213ENST00000532904 TRBV20OR9-2A0A075B6H5 130 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 PGPEP1LA6NFU8 196 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 K7ENP7 123 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 PROP1O75360 226 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 CXorf1O96002 111 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 ARL14EPLP0DKL9 152 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 VDAC2P45880 294 aaPredicted RBP14.85□□□□□ -0.03
UBXN1-213ENST00000532904 YPEL3P61236 119 aaPredicted RBP14.85□□□□□ -0.03
UBXN1-213ENST00000532904 SMIM21Q3B7S5 101 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 PDLIM3Q53GG5 364 aaPredicted RBP14.85□□□□□ -0.03
UBXN1-213ENST00000532904 TMEM256Q8N2U0 113 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 MGST2Q99735 147 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 DOCK11Q5JSL3 2073 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 FCGR3BO75015 233 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 GPR12P47775 334 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 PRAMEF5Q5TYX0 476 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 TEX38Q6PEX7 206 aa14.85□□□□□ -0.03
UBXN1-213ENST00000532904 TGIF2LXQ8IUE1 241 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms