RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 SARAFQ96BY9 339 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 TMEM242Q9NWH2 141 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 PKDREJQ9NTG1 2253 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 TRBV24-1A0A075B6N3 115 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 ZNF66Q6ZN08 573 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 MOB3BQ86TA1 216 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 FAM90A1Q86YD7 464 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 C1orf159Q96HA4 380 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 PFDN5Q99471 154 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 PRDM13Q9H4Q3 707 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 LRBAP50851 2863 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 TRAV17A0A0B4J275 112 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 A0A0U1RQK1 487 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 NDUFS6O75380 124 aaKnown RBP12.29□□□□□ -0.44
SSH3-210ENST00000532881 ATP6V1FQ16864 119 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
SSH3-210ENST00000532881 MGST2Q99735 147 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 MRPL37Q9BZE1 423 aaKnown RBP12.29□□□□□ -0.44
SSH3-210ENST00000532881 TMEM140Q9NV12 185 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 WASF3Q9UPY6 502 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 FUT9Q9Y231 359 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 GNB2P62879 340 aa12.29□□□□□ -0.44
SSH3-210ENST00000532881 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
SSH3-210ENST00000532881 FOXH1O75593 365 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 ARL14EPLP0DKL9 152 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 RELBQ01201 579 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 VWC2Q2TAL6 325 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 CT45A1Q5HYN5 189 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 CT45A3Q8NHU0 189 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 WDR83OSQ9Y284 106 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 POLEQ07864 2286 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 GFRA3O60609 400 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 HTD2P86397 168 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
SSH3-210ENST00000532881 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
SSH3-210ENST00000532881 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
SSH3-210ENST00000532881 A0A1W2PPV4 95 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 HPRT1P00492 218 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 ADH4P08319 380 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 C17orf58Q2M2W7 97 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 FAM78BQ5VT40 261 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 NEIL1Q96FI4 390 aaPredicted RBP12.27□□□□□ -0.44
SSH3-210ENST00000532881 S1PR3Q99500 378 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 CALYQ9NYX4 217 aa12.27□□□□□ -0.44
SSH3-210ENST00000532881 SAA2-SAA4A0A096LPE2 208 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 AHRRA9YTQ3 701 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.45
SSH3-210ENST00000532881 SAA2P0DJI9 122 aaPredicted RBP12.27□□□□□ -0.45
SSH3-210ENST00000532881 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.45
SSH3-210ENST00000532881 THBS3P49746 956 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 MLANAQ16655 118 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 LYG1Q8N1E2 194 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 CCL13Q99616 98 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 DCHS2Q6V1P9 2916 aa12.27□□□□□ -0.45
SSH3-210ENST00000532881 XKRY2A2RUG3 117 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 TMEM250H0YL14 139 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 GATA2P23769 480 aaPredicted RBP12.26□□□□□ -0.45
SSH3-210ENST00000532881 ACOT6Q3I5F7 207 aaPredicted RBP12.26□□□□□ -0.45
SSH3-210ENST00000532881 ARSJQ5FYB0 599 aaPredicted RBP12.26□□□□□ -0.45
SSH3-210ENST00000532881 ASPHD1Q5U4P2 390 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 OR5B12Q96R08 314 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 CTDSP1Q9GZU7 261 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 FAM215AQ9Y5M1 114 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 DMRT1Q9Y5R6 373 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 PXMP4Q9Y6I8 212 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 SCO2A0A1W2PP80 73 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 C17orf112F2Z3M2 114 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 MGST3O14880 152 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 ACTL6BO94805 426 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 MBP02144 154 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 IGFL2Q6UWQ7 119 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 C1orf162Q8NEQ5 155 aaPredicted RBP12.26□□□□□ -0.45
SSH3-210ENST00000532881 RND1Q92730 232 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 GGTLC1Q9BX51 225 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 SRD5A3Q9H8P0 318 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
SSH3-210ENST00000532881 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
SSH3-210ENST00000532881 AMBPP02760 352 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
SSH3-210ENST00000532881 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 PRSS46E5RG02 174 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 SPCS3P61009 180 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
SSH3-210ENST00000532881 YPEL1O60688 119 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 HRASP01112 189 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 FRMD6-AS1P0C7T7 363 aa12.25□□□□□ -0.45
SSH3-210ENST00000532881 KLF3P57682 345 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms