RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 MBNL2Q5VZF2 373 aaKnown RBP6.96□□□□□ -1.29
CTNND1-234ENST00000532844 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.29
CTNND1-234ENST00000532844 ABHD14BQ96IU4 210 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 NPVFQ9HCQ7 196 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 A8MWV9 139 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 RRHO14718 337 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.29
CTNND1-234ENST00000532844 CTHRC1Q96CG8 243 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 SRXN1Q9BYN0 137 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 IL36RNQ9UBH0 155 aa6.96□□□□□ -1.29
CTNND1-234ENST00000532844 ZNF236Q9UL36 1845 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 FGF5P12034 268 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM252Q8N6L7 170 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PCM1Q15154 2024 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PPIAL4DF5H284 164 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 H3BRM9 83 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PGLYRP1O75594 196 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 MC5RP33032 325 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 CCL13Q99616 98 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 RTN4RQ9BZR6 473 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 EDA2RQ9HAV5 297 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PPIAL4AQ9Y536 164 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 SLC25A15Q9Y619 301 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 PXMP4Q9Y6I8 212 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 SIPA1L1O43166 1804 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 K7N7A8 449 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 CNTFRP26992 372 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 STPG3Q8N7X2 389 aa6.96□□□□□ -1.3
CTNND1-234ENST00000532844 SDHCQ99643 169 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-234ENST00000532844 A0A1W2PS18 150 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 GRIFINA4D1Z8 144 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 WNT9BO14905 357 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 ATP5LO75964 103 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 CFDP00746 253 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 H2BFSP57053 126 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM181AQ8N9Y4 354 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 LOC101059948A0A1B0GTJ6 334 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 C1QL1O75973 258 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 EGR1P18146 543 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 KLK2P20151 261 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 CX3CL1P78423 397 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 CXorf66Q5JRM2 361 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 LINC01590Q5TEZ4 76 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 PQLC2Q6ZP29 291 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 C1orf162Q8NEQ5 155 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 RNASEH2CQ8TDP1 164 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF714Q96N38 554 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 QTRT1Q9BXR0 403 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 RSPO3Q9BXY4 272 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 C5orf66Q9H5L9 145 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 SNAI2O43623 268 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 IGHV4-39P01824 125 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 COX6A1P12074 109 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 SELENOTP62341 195 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 KRTCAP3Q53RY4 240 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF826PQ6ZT77 177 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM214BQ7L5A3 538 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 OR10W1Q8NGF6 305 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 SRSF12Q8WXF0 261 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 SCARF2Q96GP6 870 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 PSMB11A5LHX3 300 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 THY1P04216 161 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 CCL8P80075 99 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 IGLV3-21P80748 117 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF415Q09FC8 603 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 MMDQ15546 238 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FNDC4Q9H6D8 234 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 NPDC1Q9NQX5 325 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 PLSCR2Q9NRY7 297 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM56-RWDD3S4R434 201 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 KIAA0100Q14667 2235 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 XIRP1Q702N8 1843 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 CACNA1CQ13936 2221 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 PGPA6NDG6 321 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A10PA6NDY2 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A18PA6NE21 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A16PA6NEW6 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A20PA6NIJ5 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A8PA6NJQ4 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A7PA6NKC0 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A22PA8MWA6 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A12PA8MX19 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A5PA8MXJ8 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A23PA8MXZ1 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 MGST3O14880 152 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A15PP0C7V4 464 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms