RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 HLA-DRB1P01911 266 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TYMSP04818 313 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 GPX1P07203 203 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 C3orf79P0CE67 100 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 STAG3L2P0CL84 134 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 GPR183P32249 361 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 MEOX1P50221 254 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PDLIM4P50479 330 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 PSG9Q00887 426 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 FOXF1Q12946 379 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF141Q15928 474 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 LHFPL1Q86WI0 220 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 GJC3Q8NFK1 279 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 KLHDC3Q9BQ90 382 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ULBP2Q9BZM5 246 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 TECRQ9NZ01 308 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 IL36BQ9NZH7 164 aa5.8□□□□□ -1.48
TGFBR3-209ENST00000532540 ASPMQ8IZT6 3477 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 PRR14LQ5THK1 2151 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 DOCK11Q5JSL3 2073 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SPRY1O43609 319 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 GOSR1O95249 250 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ZIC2O95409 532 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 TOMM40O96008 361 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 IGFBP3P17936 291 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 GZMHP20718 246 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 MFAP2P55001 183 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ERVK-16P61578 105 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 RPS16P62249 146 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SEC11AP67812 179 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 C17orf67Q0P5P2 114 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 FOXL1Q12952 345 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 GFRALQ6UXV0 394 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM144Q7Z5S9 345 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 GAPTQ8N292 157 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SIGLEC12Q96PQ1 595 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 GEMIN7Q9H840 131 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 AKAP13Q12802 2813 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 MUC21A0A0G2JKD1 596 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 MUC21A0A140T8X8 626 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 C21orf140B9A014 251 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 H3BMH7 237 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 TNFSF11O14788 317 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 TM4SF5O14894 197 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 PDCD6O75340 191 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 NPY1RP25929 384 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 HIST1H1AQ02539 215 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 HSD52Q0P140 79 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 TDRG1Q3Y452 100 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 MUC21Q5SSG8 566 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF721Q8TF20 911 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 WDR54Q9H977 334 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ABCA2Q9BZC7 2435 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 HELZP42694 1942 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 POLQO75417 2590 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 IGHV1-45A0A0A0MS14 117 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A0G2JMM0 328 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A1W2PPB8 328 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 KIR3DP1A8MWS1 328 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 IFNL4K9M1U5 179 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 CDIPTO14735 213 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 CELA3AP09093 270 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SCGB1A1P11684 91 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 COX6A1P12074 109 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 AZU1P20160 251 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 PRDX4Q13162 271 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 H2BFWTQ7Z2G1 175 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ATG4DQ86TL0 474 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SPSB1Q96BD6 273 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 C5orf30Q96GV9 206 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 ADTRPQ96IZ2 230 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 VSTM2LQ96N03 204 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 AGMATQ9BSE5 352 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 RSPO3Q9BXY4 272 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 PLA2G2EQ9NZK7 142 aa5.79□□□□□ -1.48
TGFBR3-209ENST00000532540 SRSF10O75494 262 aaKnown RBP5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 AMY1AP04745 511 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 SMIM10L1P0DMW3 83 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 LCN12Q6JVE5 192 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 BATF2Q8N1L9 274 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 OR8B12Q8NGG6 310 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 BLNKQ8WV28 456 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 ASB10Q8WXI3 467 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 SMIM10Q96HG1 83 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 GNB4Q9HAV0 340 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF257Q9Y2Q1 563 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 WNK2Q9Y3S1 2297 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 HELTA6NFD8 242 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 CA7P43166 264 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 CSN1S1P47710 185 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 GPR12P47775 334 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 CLDN15P56746 228 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 PCOLCEQ15113 449 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 ACSF3Q4G176 576 aaPredicted RBP5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 LHFPL2Q6ZUX7 228 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 CTHRC1Q96CG8 243 aa5.78□□□□□ -1.48
TGFBR3-209ENST00000532540 CITED1Q99966 193 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms