RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 FAM169BQ8N8A8 192 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 GALR1P47211 349 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 RNF144BQ7Z419 303 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 TIMM23O14925 209 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 HIST1H3AP68431 136 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 TMEM219Q86XT9 240 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 RNF2Q99496 336 aa13.1□□□□□ -0.31
PPFIA1-222ENST00000532504 DBX1A6NMT0 343 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 KRBOX1C9JBD0 128 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 LINC00869P0C866 280 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 SLC25A16P16260 332 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 MYPOPQ86VE0 399 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 OSR1Q8TAX0 266 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 FAM210AQ96ND0 272 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 RUNX1Q01196 453 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 TNFRSF9Q07011 255 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 ZNF273Q14593 569 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 MORN2Q502X0 79 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 CHRDL1Q9BU40 450 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 MBPP02686 304 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 ZP1P60852 638 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 NPDC1Q9NQX5 325 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 WISP2O76076 250 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 FOXL2NBQ6ZUU3 175 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 OR5AC2Q9NZP5 309 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 FCGR2BP31994 310 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 ID1P41134 155 aa13.09□□□□□ -0.31
PPFIA1-222ENST00000532504 OBSL1O75147 1896 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 CD74P04233 296 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 CD300CQ08708 224 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 TMEM252Q8N6L7 170 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 OR4A47Q6IF82 309 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 ARPC1AQ92747 370 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 UCP3P55916 312 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 PAX5Q02548 391 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 BIN3Q9NQY0 253 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 F5H697 171 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 DCAF16Q9NXF7 216 aa13.08□□□□□ -0.32
PPFIA1-222ENST00000532504 MSGN1A6NI15 193 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 GUK1Q16774 197 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 TMEM187Q14656 261 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 NPIPB3Q92617 1050 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 C16orf92Q96LL3 132 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 TMEM167BQ9NRX6 74 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 FBXL7Q9UJT9 491 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 IGHV3OR16-12A0A075B7B8 117 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 A0A0A6YYD4 124 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 H0Y8G0 127 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 BMPR1BO00238 502 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 OTX1P32242 354 aaPredicted RBP13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 LRRK1Q38SD2 2015 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 A0A1W2PS18 150 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 NBR2O15453 112 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 YPEL1O60688 119 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 ABCA1O95477 2261 aa13.07□□□□□ -0.32
PPFIA1-222ENST00000532504 KIAA2026Q5HYC2 2103 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 IGHV2-26A0A0B4J1V2 119 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 LINC01356Q8N9X3 169 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 NEURL2Q9BR09 285 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 PXMP4Q9Y6I8 212 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 GNG4P50150 75 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF146Q15072 292 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 RSG1Q9BU20 258 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 TRBV6-7A0A0A0MS04 114 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 NDUFA6P56556 154 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 TMEM204Q9BSN7 226 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 HMSDA8MTL9 139 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 IGHV1-8P0DP01 117 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 BAGE3Q86Y29 109 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 GFI1Q99684 422 aa13.06□□□□□ -0.32
PPFIA1-222ENST00000532504 SPINK4O60575 86 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 HOXA4Q00056 320 aaPredicted RBP13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 LAMTOR1Q6IAA8 161 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms