RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 ZNF785A8K8V0 405 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 FCGR3BO75015 233 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 SLC22A5O76082 557 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 HLA-DQB1P01920 261 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 SLC25A42Q86VD7 318 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 NEURL2Q9BR09 285 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 ZC4H2Q9NQZ6 224 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 DIABLOQ9NR28 239 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 ZNF257Q9Y2Q1 563 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 MRPS7Q9Y2R9 242 aaKnown RBP8.57□□□□□ -1.04
VPS28-214ENST00000531032 RBMX2Q9Y388 322 aaKnown RBP8.57□□□□□ -1.04
VPS28-214ENST00000531032 PRELID3BQ9Y3B1 194 aa8.57□□□□□ -1.04
VPS28-214ENST00000531032 TRAV18A0A075B6X5 111 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 IGKV1D-13A0A0B4J2D9 117 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 C2orf70A6NJV1 201 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 LGALS9O00182 355 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 OR2J3O76001 311 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 TPPPO94811 219 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 KBTBD11O94819 623 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 CD7P09564 240 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 IGKV1-13P0DP09 117 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 NFYAP23511 347 aaPredicted RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 KIR2DS2P43631 304 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 LSM3P62310 102 aaKnown RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 RPL30P62888 115 aaKnown RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 OR2B11Q5JQS5 317 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 CNIH2Q6PI25 160 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 CROCCP3Q8IVE0 287 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 VKORC1L1Q8N0U8 176 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 OR5H6Q8NGV6 325 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 VSTM2AQ8TAG5 236 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 SLC25A38Q96DW6 304 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 HSD17B10Q99714 261 aaKnown RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 DCUN1D5Q9BTE7 237 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 SLC2A8Q9NY64 477 aa8.56□□□□□ -1.04
VPS28-214ENST00000531032 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
VPS28-214ENST00000531032 A0A0A6YYH2 397 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 A0A1B0GW64 132 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 RBMY1BA6NDE4 496 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 RBMY1EA6NEQ0 496 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 HMX3A6NHT5 357 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 A6NJ64 397 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 PPP5D1E7EU14 171 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 E7EUB6 86 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 TMEM127O75204 238 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 GGCTO75223 188 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 HLA-AP01891 365 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 RBMY1DP0C7P1 496 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 FOLR2P14207 255 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 EDN2P20800 178 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 BRWD1-AS2P59051 145 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 KLK9Q2XQG4 91 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 PUSL1Q8N0Z8 303 aaKnown RBP8.55□□□□□ -1.04
VPS28-214ENST00000531032 DEFB125Q8N687 156 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 BEST4Q8NFU0 473 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 OR4S2Q8NH73 311 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 TMEM167AQ8TBQ9 72 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 OR2A7Q96R45 310 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 FAM110AQ9BQ89 295 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 IFT46Q9NQC8 304 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 SLC2A9Q9NRM0 540 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 ANXA10Q9UJ72 324 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 FBXL7Q9UJT9 491 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 KLK9Q9UKQ9 250 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 SPATA2Q9UM82 520 aa8.55□□□□□ -1.04
VPS28-214ENST00000531032 OR11H12B2RN74 326 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 JTBO76095 146 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 OR2C1O95371 312 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 FCER2P06734 321 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 CRYGCP07315 174 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 IL6RP08887 468 aaPredicted RBP8.54□□□□□ -1.04
VPS28-214ENST00000531032 ZNF735P0CB33 412 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 MAS1LP35410 378 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 TGFBR1P36897 503 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 CBX5P45973 191 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
VPS28-214ENST00000531032 UBE2NLQ5JXB2 153 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 TCTEX1D2Q8WW35 142 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
VPS28-214ENST00000531032 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 SRD5A3Q9H8P0 318 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
VPS28-214ENST00000531032 DPPA5A6NC42 116 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 A8MWP6 167 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 SSX5O60225 188 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 NDUFB8O95169 186 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 AREGP15514 252 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 CBLN1P23435 193 aa8.53□□□□□ -1.04
VPS28-214ENST00000531032 ARL3P36405 182 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms