RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 HTR1DP28221 377 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 TFF3Q07654 80 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 KIAA1644Q3SXP7 199 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 WDR74Q6RFH5 385 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-214ENST00000530886 PCSK4Q6UW60 755 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 ZDHHC23Q8IYP9 409 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 ZNF441Q8N8Z8 693 aa6.8□□□□□ -1.32
CSDE1-214ENST00000530886 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
CSDE1-214ENST00000530886 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
CSDE1-214ENST00000530886 TDRD6O60522 2096 aaKnown RBP6.8□□□□□ -1.32
CSDE1-214ENST00000530886 IGKV1-6A0A0C4DH72 117 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 A0A1W2PPM0 123 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 TNFSF11O14788 317 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 MPDU1O75352 247 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 OR7C1O76099 320 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-214ENST00000530886 NOGQ13253 232 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 MFAP5Q13361 173 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 OR2Z1Q8NG97 314 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 ST6GALNAC6Q969X2 333 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 OR2D2Q9H210 308 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 KCNIP1Q9NZI2 227 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 OR2W1Q9Y3N9 320 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 A0A0G2JLM5 398 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 RHBDL1O75783 438 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 HBZP02008 142 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 OR5AL1P0C617 328 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 P0C879 139 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 IL12BP29460 328 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 RPL31P62899 125 aaKnown RBP6.79□□□□□ -1.32
CSDE1-214ENST00000530886 SLC23A3Q6PIS1 610 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 ZNF645Q8N7E2 425 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 CT55Q8WUE5 264 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 ZNF442Q9H7R0 627 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 SIGLEC8Q9NYZ4 499 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 MTCH1Q9NZJ7 389 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 THYN1Q9P016 225 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 WDR83OSQ9Y284 106 aa6.79□□□□□ -1.32
CSDE1-214ENST00000530886 A0A087X0K7 114 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 J3QR89 54 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 LAMTOR5O43504 91 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 CYC1P08574 325 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 SCTP09683 121 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 CYB561P49447 251 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 SUMO3P55854 103 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 DMRTC1Q5HYR2 192 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 KIR3DL3Q8N743 410 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 GJC3Q8NFK1 279 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 RNF138Q8WVD3 245 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 IGKV3D-11A0A0A0MRZ8 115 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 TEX48A0A1B0GUV7 120 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 SIVA1O15304 175 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 IGLV2-14P01704 120 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 OPRK1P41145 380 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 URB1-AS1Q96HZ7 61 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 GPHA2Q96T91 129 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 C21orf140B9A014 251 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 CA3P07451 260 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 CDAP32320 146 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 PPOXP50336 477 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 TMEM164Q5U3C3 297 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 FAM69BQ5VUD6 431 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 SYT13Q7L8C5 426 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 BORCS8Q96FH0 119 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 EMC6Q9BV81 110 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 LIN7CQ9NUP9 197 aaKnown RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 JPT1Q9UK76 154 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 BOKQ9UMX3 212 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 PPP1R3CQ9UQK1 317 aa6.78□□□□□ -1.32
CSDE1-214ENST00000530886 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
CSDE1-214ENST00000530886 TNRC6AQ8NDV7 1962 aaKnown RBP6.77□□□□□ -1.32
CSDE1-214ENST00000530886 FREM2Q5SZK8 3169 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 LRRC30A6NM36 301 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 EFNA2O43921 213 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 USF1P22415 310 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 ARF1P84077 181 aaKnown RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 GABRA6Q16445 453 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 RHBDD2Q6NTF9 364 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 SHISA6Q6ZSJ9 500 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 BPIFA4PQ86YQ2 179 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 SFTPA2Q8IWL1 248 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 H1FXQ92522 213 aaKnown RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 SPCS1Q9Y6A9 102 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 EML6Q6ZMW3 1958 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 A0A1W2PPV4 95 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 K7EQM0 130 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 CLDN1O95832 211 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms