RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 OR5AC1P0C628 307 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF735P0CB33 412 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 CT45A6P0DMU7 189 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 CT45A5P0DMU8 189 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 CT45A7P0DMV0 189 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 PI3P19957 117 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 VDAC1P21796 283 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 UCP1P25874 307 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 CHRNA7P36544 502 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 IER3P46695 156 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 DLX1P56177 255 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 UBE2KP61086 200 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SLC35B1P78383 322 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 HABP2Q14520 560 aaPredicted RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SLC9A3R2Q15599 337 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM177Q53S58 311 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 OR2B11Q5JQS5 317 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM268Q5VZI3 342 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 NRARPQ7Z6K4 114 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 MMD2Q8IY49 270 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 CADM3Q8N126 398 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SIGLECL1Q8N7X8 197 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 DRAXINQ8NBI3 349 aaPredicted RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 UXS1Q8NBZ7 420 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 OR4F5Q8NH21 305 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 OR2T6Q8NHC8 308 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SGMS2Q8NHU3 365 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF431Q8TF32 576 aaPredicted RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 C22orf15Q8WYQ4 148 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 R3HDM4Q96D70 268 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 RHOVQ96L33 236 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM68Q96MH6 324 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM56Q96MV1 263 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SRSF8Q9BRL6 282 aaKnown RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 MARVELD1Q9BSK0 173 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 COMMD5Q9GZQ3 224 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 TMEM222Q9H0R3 208 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 PRDM13Q9H4Q3 707 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 C5orf66Q9H5L9 145 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 METTL1Q9UBP6 276 aaKnown RBP3.84□□□□□ -1.79
SSBP3-213ENST00000530618 SHPKQ9UHJ6 478 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 VSIG4Q9Y279 399 aa3.84□□□□□ -1.79
SSBP3-213ENST00000530618 LYSTQ99698 3801 aa3.84□□□□□ -1.8
SSBP3-213ENST00000530618 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 IGHV3-72A0A0B4J1Y9 119 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 A0A1B0GU03 582 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C9orf170A2RU37 121 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C5orf51A6NDU8 294 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 DNAJC9-AS1A6NH13 148 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 RRHO14718 337 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SLC25A17O43808 307 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 KBTBD11O94819 623 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 CDS2O95674 445 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 KRASP01116 189 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 IFNA17P01571 189 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 RLN2P04090 185 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 RNASE1P07998 156 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SLC25A6P12236 298 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 ANXA7P20073 488 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PVALBP20472 110 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 LPAR6P43657 344 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 MECP2P51608 486 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SUB1P53999 127 aaKnown RBP eCLIP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 RPL8P62917 257 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 ERHP84090 104 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 RELBQ01201 579 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PRB3Q04118 309 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 FGL1Q08830 312 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 DHRS2Q13268 280 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PPP1R1AQ13522 171 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 EBI3Q14213 229 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 HNF4GQ14541 408 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 TATDN3Q17R31 274 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C5orf64Q2M2E5 130 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PDLIM3Q53GG5 364 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C9orf152Q5JTZ5 239 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 FAM209BQ5JX69 171 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 CCBE1Q6UXH8 406 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 GSG1LQ6UXU4 331 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 GLDNQ6ZMI3 551 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PPP1R27Q86WC6 154 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C12orf45Q8N5I9 185 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 SLC35G3Q8N808 338 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 C3orf56Q8N813 242 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 LRTM2Q8N967 370 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF383Q8NA42 475 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 NPBQ8NG41 125 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 OR1L6Q8NGR2 347 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 OR5B3Q8NH48 314 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 OR1S1Q8NH92 325 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 MITD1Q8WV92 249 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 DDB2Q92466 427 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 LSM10Q969L4 123 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 MRGPRFQ96AM1 343 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 EAF1Q96JC9 268 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 CIB3Q96Q77 187 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms