RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PTTG1O95997 202 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 DHFRP00374 187 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 PPYP01298 95 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 IGHV3-11P01762 117 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 PRSS3P35030 304 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 BCAP31P51572 246 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 TAS2R46P59540 309 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 LSM3P62310 102 aaKnown RBP7.41□□□□□ -1.22
CHD7-208ENST00000528280 LPCAT3Q6P1A2 487 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 ZNF343Q6P1L6 599 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 ACSM6Q6P461 480 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 GVQW1Q8N7I0 195 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 SAMD12Q8N8I0 201 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 SECTM1Q8WVN6 248 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 SRSF12Q8WXF0 261 aaKnown RBP7.41□□□□□ -1.22
CHD7-208ENST00000528280 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 SLC25A46Q96AG3 418 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 C5orf30Q96GV9 206 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 PEF1Q9UBV8 284 aaKnown RBP7.41□□□□□ -1.22
CHD7-208ENST00000528280 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
CHD7-208ENST00000528280 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 A0A087WW49 117 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 IGKV1D-13A0A0B4J2D9 117 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 LY86O95711 162 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 HPRT1P00492 218 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 IGLV2-14P01704 120 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 APOA1P02647 267 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 FGF2P09038 288 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 SAA1P0DJI8 122 aaPredicted RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 IGKV1-13P0DP09 117 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 S100GP29377 79 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 RORCP51449 518 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 SLURP1P55000 103 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 DEFA1P59665 94 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 DEFA3P59666 94 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 HERV-K104P61576 105 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 SSBP2P81877 361 aaPredicted RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 ATP5G2Q06055 141 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 EIF4EBP1Q13541 118 aaPredicted RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 SPANXN2Q5MJ10 180 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 ASPHD1Q5U4P2 390 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 MZT2AQ6P582 158 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 CMTM1Q8IZ96 169 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 NECAP1Q8NC96 275 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 ADAD2Q8NCV1 583 aaKnown RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 OR6F1Q8NGZ6 308 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 TMEM167AQ8TBQ9 72 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 CASTOR1Q8WTX7 329 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 AP3S1Q92572 193 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 ALX4Q9H161 411 aaPredicted RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 ZNF430Q9H8G1 570 aaPredicted RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 CCL28Q9NRJ3 127 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 TAS2R8Q9NYW2 309 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
CHD7-208ENST00000528280 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.22
CHD7-208ENST00000528280 RYR2Q92736 4967 aa7.4□□□□□ -1.23
CHD7-208ENST00000528280 H0Y980 276 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SULT1C2O00338 296 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 CYB5BO43169 146 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 TPPPO94811 219 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 KBTBD11O94819 623 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 HNRNPCP07910 306 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHD7-208ENST00000528280 NQO2P16083 231 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 HIST1H1BP16401 226 aaKnown RBP7.39□□□□□ -1.23
CHD7-208ENST00000528280 NAT1P18440 290 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 PTBP1P26599 531 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHD7-208ENST00000528280 TAS2R31P59538 309 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 TAS2R20P59543 309 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 DYRK1AQ13627 763 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 KLF5Q13887 457 aaPredicted RBP7.39□□□□□ -1.23
CHD7-208ENST00000528280 MRGPRG-AS1Q2M3A8 158 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 IDO2Q6ZQW0 420 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 CCDC190Q86UF4 302 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SPAG16Q8N0X2 631 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 PUSL1Q8N0Z8 303 aaKnown RBP7.39□□□□□ -1.23
CHD7-208ENST00000528280 CADM3Q8N126 398 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 OR5H2Q8NGV7 314 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 C15orf40Q8WUR7 153 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
CHD7-208ENST00000528280 C6orf62Q9GZU0 229 aaPredicted RBP7.39□□□□□ -1.23
CHD7-208ENST00000528280 PLEKHA2Q9HB19 425 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SCPEP1Q9HB40 452 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SLC2A9Q9NRM0 540 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 BET1LQ9NYM9 111 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 EHFQ9NZC4 300 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 COMMD3Q9UBI1 195 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
CHD7-208ENST00000528280 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 TRBV9A0A0B4J1U6 114 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 ANKRD34BA5PLL1 514 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 RPL27AP46776 148 aaKnown RBP7.38□□□□□ -1.23
CHD7-208ENST00000528280 FXYD4P59646 89 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 RPL8P62917 257 aaKnown RBP7.38□□□□□ -1.23
CHD7-208ENST00000528280 RPEL1Q2QD12 228 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
CHD7-208ENST00000528280 LYSMD2Q8IV50 215 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms