RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 OR4A5Q8NH83 315 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 CD300LFQ8TDQ1 290 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 PRR25Q96S07 402 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 GNRHRP30968 328 aa25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 RFX2P48378 723 aa25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 POU2AF1Q16633 256 aa25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 AP3S1Q92572 193 aa25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 MRPS26Q9BYN8 205 aaKnown RBP25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 BET1LQ9NYM9 111 aa25.38■■□□□ 1.65
SSSCA1-205ENST00000527920 SULT1C2O00338 296 aa25.37■■□□□ 1.65
SSSCA1-205ENST00000527920 TAS2R31P59538 309 aa25.37■■□□□ 1.65
SSSCA1-205ENST00000527920 MZT2AQ6P582 158 aa25.37■■□□□ 1.65
SSSCA1-205ENST00000527920 ZNF2Q9BSG1 426 aaPredicted RBP25.37■■□□□ 1.65
SSSCA1-205ENST00000527920 NAA50Q9GZZ1 169 aaKnown RBP25.37■■□□□ 1.65
SSSCA1-205ENST00000527920 TEX22C9J3V5 150 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 HPRT1P00492 218 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 PMP2P02689 132 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 ELK1P19419 428 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 RPL27AP46776 148 aaKnown RBP25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 RPL8P62917 257 aaKnown RBP25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 CD69Q07108 199 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 LYSMD2Q8IV50 215 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 ELOVL1Q9BW60 279 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 PEF1Q9UBV8 284 aaKnown RBP25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 ZNF257Q9Y2Q1 563 aa25.36■■□□□ 1.65
SSSCA1-205ENST00000527920 SORL1Q92673 2214 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 RBMXL2O75526 392 aaKnown RBP25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 FGF2P09038 288 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 ZNF735P0CB33 412 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 RHOGP84095 191 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 KLF5Q13887 457 aaPredicted RBP25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 OR6Q1Q8NGQ2 317 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 OR4C12Q96R67 309 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 PLEKHA2Q9HB19 425 aa25.35■■□□□ 1.65
SSSCA1-205ENST00000527920 ANKRD34BA5PLL1 514 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 NPIPB5A8MRT5 1133 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 HPGDSO60760 199 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 IL6RP08887 468 aaPredicted RBP25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 NQO2P16083 231 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 HRH1P35367 487 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 ZNF45Q02386 682 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 AADACL3Q5VUY0 350 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 OR4A47Q6IF82 309 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 SSX9Q7RTT3 188 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 NECAP1Q8NC96 275 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 OR6F1Q8NGZ6 308 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 OR51H1Q8NH63 302 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 AKIP1Q9NQ31 210 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 SLC2A9Q9NRM0 540 aa25.34■■□□□ 1.65
SSSCA1-205ENST00000527920 ZNF182P17025 639 aaPredicted RBP25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 RCVRNP35243 200 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 ALDH3B2P48448 385 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 DEFA5Q01523 94 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 FAM209BQ5JX69 171 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 GPR107Q5VW38 600 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 COMMD9Q9P000 198 aa25.33■■□□□ 1.65
SSSCA1-205ENST00000527920 HLA-GP17693 338 aa25.32■■□□□ 1.64
SSSCA1-205ENST00000527920 SNX29P2Q8IUI4 249 aa25.32■■□□□ 1.64
SSSCA1-205ENST00000527920 HMX3A6NHT5 357 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 TPPPO94811 219 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 HLA-DMAP28067 261 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 ATP5G2Q06055 141 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 GPR141Q7Z602 305 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 CMTM1Q8IZ96 169 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 FXYD6Q9H0Q3 95 aa25.31■■□□□ 1.64
SSSCA1-205ENST00000527920 A0A1B0GW64 132 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 E7EUB6 86 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 PGLYRP1O75594 196 aaPredicted RBP25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 LY86O95711 162 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 PRH1P02810 166 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 CRYGCP07315 174 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 KLK9Q2XQG4 91 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 HRASLSQ9HDD0 168 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 KLK9Q9UKQ9 250 aa25.3■■□□□ 1.64
SSSCA1-205ENST00000527920 EXOSC2Q13868 293 aaKnown RBP25.29■■□□□ 1.64
SSSCA1-205ENST00000527920 CADM3Q8N126 398 aa25.29■■□□□ 1.64
SSSCA1-205ENST00000527920 OR9G4Q8NGQ1 327 aa25.29■■□□□ 1.64
SSSCA1-205ENST00000527920 FYTTD1Q96QD9 318 aaKnown RBP25.29■■□□□ 1.64
SSSCA1-205ENST00000527920 DNAH9Q9NYC9 4486 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 COL7A1Q02388 2944 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 DPPA5A6NC42 116 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 GPR31O00270 319 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 S1PR2O95136 353 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 TRBV12-3P01733 135 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 RLN1P04808 185 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 SPNP16150 400 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 F2RP25116 425 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 LPCAT3Q6P1A2 487 aa25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 SRSF8Q9BRL6 282 aaKnown RBP25.28■■□□□ 1.64
SSSCA1-205ENST00000527920 FAM25AB3EWG3 89 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 FAM25CB3EWG5 89 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 FAM25GB3EWG6 89 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 UPK2O00526 184 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 DHFRP00374 187 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 IGLV1-51P01701 117 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 TATDN3Q17R31 274 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 RPEL1Q2QD12 228 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 TMEM140Q9NV12 185 aa25.27■■□□□ 1.64
SSSCA1-205ENST00000527920 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 NHLRC4P0CG21 123 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms