RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 XRCC3O43542 346 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 OR2A4O95047 310 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 HRASP01112 189 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 MAS1LP35410 378 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 KIR2DS2P43631 304 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 BRWD1-AS2P59051 145 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 ARPC4P59998 168 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 DYRK1AQ13627 763 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 FAM209BQ5JX69 171 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 IDO2Q6ZQW0 420 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 FAM223AQ8IWN6 122 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 PUSL1Q8N0Z8 303 aaKnown RBP8□□□□□ -1.13
CPSF1-203ENST00000527916 GVQW1Q8N7I0 195 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 TMEM167AQ8TBQ9 72 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 GIMAP1Q8WWP7 306 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 ACOT12Q8WYK0 555 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 SNAPC3Q92966 411 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 S100A16Q96FQ6 103 aaKnown RBP8□□□□□ -1.13
CPSF1-203ENST00000527916 OR2A7Q96R45 310 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 AUNIPQ9H7T9 357 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 COA4Q9NYJ1 87 aa8□□□□□ -1.13
CPSF1-203ENST00000527916 A0A087WXM4 84 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 RBFOX2O43251 390 aaKnown RBP eCLIP7.99□□□□□ -1.137e-7■■□□□ 12.3
CPSF1-203ENST00000527916 AIREO43918 545 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 PPYP01298 95 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 FCGR2CP31995 323 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 KLK9Q2XQG4 91 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 IL34Q6ZMJ4 242 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 NECAP1Q8NC96 275 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 TSPAN14Q8NG11 270 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 OR9G4Q8NGQ1 327 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 TCTEX1D2Q8WW35 142 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 YIPF6Q96EC8 236 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 FAM110AQ9BQ89 295 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 HIPK2Q9H2X6 1198 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 RETNQ9HD89 108 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 KLK9Q9UKQ9 250 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 CEPT1Q9Y6K0 416 aa7.99□□□□□ -1.13
CPSF1-203ENST00000527916 NPIPB5A8MRT5 1133 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 MPPED1O15442 326 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 RBMXL2O75526 392 aaKnown RBP7.98□□□□□ -1.13
CPSF1-203ENST00000527916 KBTBD11O94819 623 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 TNFAIP8O95379 198 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 CRYGCP07315 174 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 FGF2P09038 288 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 RPS19P39019 145 aaKnown RBP7.98□□□□□ -1.13
CPSF1-203ENST00000527916 RHOGP84095 191 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 ZNF45Q02386 682 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 ATP5G2Q06055 141 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 DHRS11Q6UWP2 260 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 VKORC1L1Q8N0U8 176 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 OR13F1Q8NGS4 319 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 SECTM1Q8WVN6 248 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 BORCS5Q969J3 196 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 KCTD12Q96CX2 325 aaKnown RBP7.98□□□□□ -1.13
CPSF1-203ENST00000527916 VCX3AQ9NNX9 186 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 AKIP1Q9NQ31 210 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 CCL28Q9NRJ3 127 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 BET1LQ9NYM9 111 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 TAS2R8Q9NYW2 309 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 ANAPC10Q9UM13 185 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 ZNF257Q9Y2Q1 563 aa7.98□□□□□ -1.13
CPSF1-203ENST00000527916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.97□□□□□ -1.13
CPSF1-203ENST00000527916 HPRT1P00492 218 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 TRBV12-3P01733 135 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 CSN3P07498 182 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
CPSF1-203ENST00000527916 ZNF735P0CB33 412 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 APELAP0DMC3 54 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 NAT1P18440 290 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 RPL27AP46776 148 aaKnown RBP7.97□□□□□ -1.13
CPSF1-203ENST00000527916 MECP2P51608 486 aaKnown RBP7.97□□□□□ -1.13
CPSF1-203ENST00000527916 SYNJ2BPP57105 145 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 CATR1Q13166 79 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 RPEL1Q2QD12 228 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 OR2B11Q5JQS5 317 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 UBE2NLQ5JXB2 153 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 LCN12Q6JVE5 192 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 CD300LFQ8TDQ1 290 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 GATAD1Q8WUU5 269 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 CMTM3Q96MX0 182 aa7.97□□□□□ -1.13
CPSF1-203ENST00000527916 CXorf65A6NEN9 183 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 E7EUB6 86 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 DHFRP00374 187 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 PTHLHP12272 177 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 TGFBR1P36897 503 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 TAS2R31P59538 309 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 RPL8P62917 257 aaKnown RBP7.96□□□□□ -1.14
CPSF1-203ENST00000527916 DEFA5Q01523 94 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 C10orf55Q5SWW7 151 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 SPAG16Q8N0X2 631 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 CADM3Q8N126 398 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms