RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OR5AP2Q8NGF4 316 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 OR4A16Q8NH70 328 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 MRPL30Q8TCC3 161 aaKnown RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 PINX1Q96BK5 328 aaKnown RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 TMEM204Q9BSN7 226 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 FXYD6Q9H0Q3 95 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 KLK15Q9H2R5 256 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 OR51M1Q9H341 326 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 OR51J1Q9H342 316 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 MAP6D1Q9H9H5 199 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 RHOFQ9HBH0 211 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 RNF7Q9UBF6 113 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4Q9UBX2 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 ANXA10Q9UJ72 324 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 SCP2D1Q9UJQ7 156 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 FOXA2Q9Y261 457 aaPredicted RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 VSIG4Q9Y279 399 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 WIPI2Q9Y4P8 454 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 AUP1Q9Y679 476 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 TGP01266 2768 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 COL6A5A8TX70 2615 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 IGKV1-6A0A0C4DH72 117 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 C7orf66A4D0T2 115 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR5H14A6NHG9 310 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FAM90A26D6RGX4 464 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 PPIAL4DF5H284 164 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 LYNX1G3V0Z9 82 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RS1O15537 224 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SSNA1O43805 119 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FCGR3BO75015 233 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ADAP1O75689 374 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 LY6HO94772 140 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR2F2O95006 317 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 LHBP01229 141 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 IFNA10P01566 189 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 GYPAP02724 150 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 PPBPP02775 128 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 IFNA4P05014 189 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 CRYGBP07316 175 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 CD55P08174 381 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SCTP09683 121 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR5H8P0DN80 308 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 LYNX1P0DP58 116 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SPP1P10451 314 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 IRF2P14316 349 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 DAOP14920 347 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 PGAM2P15259 253 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RCC1P18754 421 aaPredicted RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 NFYAP23511 347 aaPredicted RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 SSTR2P30874 369 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 PRDX2P32119 198 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ID1P41134 155 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 AKR1D1P51857 326 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RAG2P55895 527 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FXYD4P59646 89 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SEC61A1P61619 476 aaKnown RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 RRAS2P62070 204 aaPredicted RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 HLA-DRB3P79483 266 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RPL19P84098 196 aaKnown RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 AESQ08117 197 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 PJVKQ0ZLH3 352 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 GAGE1Q13065 139 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 UBE2V1Q13404 147 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RAB31Q13636 194 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 RBM39Q14498 530 aaKnown RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 EDDM3AQ14507 147 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 HERPUD1Q15011 391 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FCN2Q15485 313 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 EFNB3Q15768 340 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 HAGHQ16775 308 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SPIN3Q5JUX0 258 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 VAX1Q5SQQ9 334 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 AADACL3Q5VUY0 350 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ZNF660Q6AZW8 331 aaPredicted RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 PRR27Q6MZM9 219 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FAHD2BQ6P2I3 314 aaPredicted RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 ZNF880Q6PDB4 577 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ZNF497Q6ZNH5 498 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SLC36A1Q7Z2H8 476 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 LHFPL1Q86WI0 220 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FGFRL1Q8N441 504 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 TPRX1Q8N7U7 411 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ADAD2Q8NCV1 583 aaKnown RBP3.42□□□□□ -1.86
CD44-226ENST00000527889 OR11H7Q8NGC8 314 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR9G4Q8NGQ1 327 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR11L1Q8NGX0 322 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 OR1L1Q8NH94 360 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 TERB2Q8NHR7 220 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 COQ8AQ8NI60 647 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 MRAPQ8TCY5 172 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FAM222BQ8WU58 562 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 DEDD2Q8WXF8 326 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 SMIM12Q96EX1 92 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FAHD2AQ96GK7 314 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 COQ2Q96H96 371 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 ST6GAL2Q96JF0 529 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 DCTN5Q9BTE1 182 aa3.42□□□□□ -1.86
CD44-226ENST00000527889 FAM234AQ9H0X4 552 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms