RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CTXN2P0C2S0 81 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 AKAIN1P0CW23 69 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 TPPP2P59282 170 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 ARFRP1Q13795 201 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 TMEM177Q53S58 311 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 IGSF11Q5DX21 431 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 ACSM6Q6P461 480 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 PLET1Q6UQ28 207 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 GINS4Q9BRT9 223 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 MARVELD1Q9BSK0 173 aa10.96□□□□□ -0.65
CAPN1-212ENST00000527887 FAM103A1Q9BTL3 118 aaKnown RBP10.96□□□□□ -0.65
CAPN1-212ENST00000527887 RANGRFQ9HD47 186 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-212ENST00000527887 RBM7Q9Y580 266 aaKnown RBP10.96□□□□□ -0.65
CAPN1-212ENST00000527887 SLC22A5O76082 557 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 LY86O95711 162 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 TRGV3P03979 118 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 CRYGBP07316 175 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 ZP3P21754 424 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 LINC00205P59089 165 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 MEF2DQ14814 521 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 TEX45Q8NA69 505 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 HARBI1Q96MB7 349 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 ELOVL1Q9BW60 279 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-212ENST00000527887 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 U3KQK5 164 aa10.95□□□□□ -0.66
CAPN1-212ENST00000527887 KMT2CQ8NEZ4 4911 aaKnown RBP10.95□□□□□ -0.66
CAPN1-212ENST00000527887 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 A0A087WW49 117 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 C13orf42A0A1B0GVH6 325 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 SHOXO15266 292 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 IGLV2-23P01705 113 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 AADACP22760 399 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 SLURP1P55000 103 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 STEAP1BQ6NZ63 245 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 HOGA1Q86XE5 327 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 GRPEL2Q8TAA5 225 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 OR4C12Q96R67 309 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 ZNF355PQ9NSJ1 428 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 SLC2A8Q9NY64 477 aa10.94□□□□□ -0.66
CAPN1-212ENST00000527887 ZNF230Q9UIE0 474 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-212ENST00000527887 SSX5O60225 188 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 CREBL2O60519 120 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-212ENST00000527887 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 PTHLHP12272 177 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
CAPN1-212ENST00000527887 BTCP35070 178 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 VMA21Q3ZAQ7 101 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 H1FOOQ8IZA3 346 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-212ENST00000527887 BVESQ8NE79 360 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-212ENST00000527887 CASTOR1Q8WTX7 329 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 SLC25A21Q9BQT8 299 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-212ENST00000527887 IFT46Q9NQC8 304 aa10.93□□□□□ -0.66
CAPN1-212ENST00000527887 LINC00854A0A1B0GVQ3 168 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 TCRBP04435 133 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 GP9P14770 177 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 MECP2P51608 486 aaKnown RBP10.92□□□□□ -0.66
CAPN1-212ENST00000527887 TAS2R46P59540 309 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 UBE2KP61086 200 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-212ENST00000527887 RNASE10Q5GAN6 216 aaKnown RBP10.92□□□□□ -0.66
CAPN1-212ENST00000527887 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 OR5T1Q8NG75 326 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 CHAC2Q8WUX2 184 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 DDB2Q92466 427 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 TINAGL1Q9GZM7 467 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-212ENST00000527887 STAB2Q8WWQ8 2551 aa10.92□□□□□ -0.66
CAPN1-212ENST00000527887 SRRM4A7MD48 611 aaKnown RBP10.91□□□□□ -0.66
CAPN1-212ENST00000527887 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 NDUFB6O95139 128 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 RAB3DO95716 219 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 CD3DP04234 171 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 PJVKQ0ZLH3 352 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 TATDN3Q17R31 274 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 RNASE12Q5GAN4 147 aaKnown RBP10.91□□□□□ -0.66
CAPN1-212ENST00000527887 ZNF645Q8N7E2 425 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 OR4C16Q8NGL9 310 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 NUDCD2Q8WVJ2 157 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 MAFIPQ8WZ33 124 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 PPP1R14BQ96C90 147 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 PRRT1Q99946 306 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 SCP2D1Q9UJQ7 156 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 ELF5Q9UKW6 265 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-212ENST00000527887 PRELID3BQ9Y3B1 194 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 OR2W1Q9Y3N9 320 aa10.91□□□□□ -0.66
CAPN1-212ENST00000527887 A0A1B0GVG6 124 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 DHFRP00374 187 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 SPNP16150 400 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-212ENST00000527887 RBMS2Q15434 407 aaKnown RBP10.9□□□□□ -0.66
CAPN1-212ENST00000527887 PRSS8Q16651 343 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 ZNF343Q6P1L6 599 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 TMEM17Q86X19 198 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 BEST4Q8NFU0 473 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 OR5AP2Q8NGF4 316 aa10.9□□□□□ -0.66
CAPN1-212ENST00000527887 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms