RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DDB2Q92466 427 aa15.25■□□□□ 0.03
SMPD1-203ENST00000527275 SAT2Q96F10 170 aaPredicted RBP15.25■□□□□ 0.03
SMPD1-203ENST00000527275 PCGF1Q9BSM1 259 aa15.25■□□□□ 0.03
SMPD1-203ENST00000527275 SIRPDQ9H106 197 aa15.25■□□□□ 0.03
SMPD1-203ENST00000527275 RBKSQ9H477 322 aa15.25■□□□□ 0.03
SMPD1-203ENST00000527275 MED6O75586 246 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 SULT1A1P50225 295 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 TAS2R30P59541 319 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 TMEM249Q2WGJ8 235 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 VMO1Q7Z5L0 202 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 HSD17B11Q8NBQ5 300 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 TMA7Q9Y2S6 64 aaKnown RBP15.24■□□□□ 0.03
SMPD1-203ENST00000527275 IGHV2-26A0A0B4J1V2 119 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 TOX4O94842 621 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 SPP1P10451 314 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 COX7A1P24310 79 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 LINC01356Q8N9X3 169 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 OR9G1Q8NH87 305 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 UNKLQ9H9P5 680 aaKnown RBP15.24■□□□□ 0.03
SMPD1-203ENST00000527275 HIF1ANQ9NWT6 349 aa15.24■□□□□ 0.03
SMPD1-203ENST00000527275 J3QR06 171 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 RBMXL2O75526 392 aaKnown RBP15.23■□□□□ 0.03
SMPD1-203ENST00000527275 THBS3P49746 956 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 PAX8Q06710 450 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 TMEM267Q0VDI3 215 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-203ENST00000527275 TNFRSF14Q92956 283 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 MARC2Q969Z3 335 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
SMPD1-203ENST00000527275 CCDC28AQ8IWP9 274 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 PNKDQ8N490 385 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 TMEM186Q96B77 213 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 ADTRPQ96IZ2 230 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 CLEC7AQ9BXN2 247 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 ACANP16112 2415 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 NQO2P16083 231 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 KLRD1Q13241 179 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 SSX9Q7RTT3 188 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 ZNF383Q8NA42 475 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 OR4S2Q8NH73 311 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 TBX15Q96SF7 602 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 SH3BGRL3Q9H299 93 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 TLN2Q9Y4G6 2542 aa15.22■□□□□ 0.03
SMPD1-203ENST00000527275 CRYZL1O95825 349 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 TGFAP01135 160 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 IGLV1-47P01700 117 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 IGHV4-31P0DP07 118 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 ERVK-16P61578 105 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 BLOC1S1P78537 153 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 SPANXN5Q5MJ07 72 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 PXDC1Q5TGL8 231 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 HCP5Q6MZN7 132 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 C8orf31Q8N9H6 132 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 OR13D1Q8NGV5 346 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 OR10X1Q8NGY0 326 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 ATP5SQ99766 215 aa15.21■□□□□ 0.03
SMPD1-203ENST00000527275 TRAV20A0A0B4J274 112 aa15.21■□□□□ 0.02
SMPD1-203ENST00000527275 FAM90A9PA6NNJ1 464 aa15.21■□□□□ 0.02
SMPD1-203ENST00000527275 OR9G9P0C7N8 305 aa15.21■□□□□ 0.02
SMPD1-203ENST00000527275 METTL15P1P0C7V9 234 aa15.21■□□□□ 0.02
SMPD1-203ENST00000527275 ZNF596Q8TC21 504 aa15.21■□□□□ 0.02
SMPD1-203ENST00000527275 RNASEK-C17orf49H0YIS7 233 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 ARHGDIBP52566 201 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 VKORC1L1Q8N0U8 176 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 LINC00311Q8N616 119 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 C17orf50Q8WW18 174 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 LINC00052Q96N35 136 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 HRH4Q9H3N8 390 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 OTOGQ6ZRI0 2925 aa15.2■□□□□ 0.02
SMPD1-203ENST00000527275 RAB19A4D1S5 217 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 DFFBO76075 338 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 ATP6V0CP27449 155 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 OR11H6Q8NGC7 330 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 QTRT1Q9BXR0 403 aaKnown RBP15.19■□□□□ 0.02
SMPD1-203ENST00000527275 C7orf69Q9H7B7 122 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 PARP11Q9NR21 331 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 SETXQ7Z333 2677 aaKnown RBP15.19■□□□□ 0.02
SMPD1-203ENST00000527275 KRBOX1C9JBD0 128 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 SMAD7O15105 426 aaKnown RBP15.19■□□□□ 0.02
SMPD1-203ENST00000527275 CT45A6P0DMU7 189 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 CT45A5P0DMU8 189 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 CT45A7P0DMV0 189 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 HOXB4P17483 251 aaPredicted RBP15.19■□□□□ 0.02
SMPD1-203ENST00000527275 ZP3P21754 424 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 PRRX1P54821 245 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 ARL16Q0P5N6 197 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 HLA-DRB5Q30154 266 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 BEND2Q8NDZ0 799 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 OR4A16Q8NH70 328 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 DTD1Q8TEA8 209 aa15.19■□□□□ 0.02
SMPD1-203ENST00000527275 NUDT19A8MXV4 375 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 SHOXO15266 292 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 Q6ZRG5 221 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 OR4P4Q8NGL7 312 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 LHX4Q969G2 390 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 ZDHHC16Q969W1 377 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 CACFD1Q9UGQ2 172 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 A0A1W2PRD5 423 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 A0A1W2PRF3 423 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 A0A1W2PRM7 423 aa15.18■□□□□ 0.02
SMPD1-203ENST00000527275 CEBPZOSA8MTT3 80 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms