RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 FGF2P09038 288 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 ZNF182P17025 639 aaPredicted RBP15.88■□□□□ 0.13
VPS28-206ENST00000526734 RCVRNP35243 200 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 RPL27AP46776 148 aaKnown RBP15.88■□□□□ 0.13
VPS28-206ENST00000526734 POU2AF1Q16633 256 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 ZNF343Q6P1L6 599 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 ACSM6Q6P461 480 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 ZNF818PQ6ZRF7 136 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 GPR141Q7Z602 305 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 TTC9CQ8N5M4 171 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 OR6F1Q8NGZ6 308 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 ZNF2Q9BSG1 426 aaPredicted RBP15.88■□□□□ 0.13
VPS28-206ENST00000526734 ELOVL1Q9BW60 279 aa15.88■□□□□ 0.13
VPS28-206ENST00000526734 NQO2P16083 231 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 RFX2P48378 723 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 RPL8P62917 257 aaKnown RBP15.87■□□□□ 0.13
VPS28-206ENST00000526734 AADACL3Q5VUY0 350 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 GPR107Q5VW38 600 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 CMTM1Q8IZ96 169 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 VKORC1L1Q8N0U8 176 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 OR6Q1Q8NGQ2 317 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 C15orf40Q8WUR7 153 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 OR4C12Q96R67 309 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 B9D2Q9BPU9 175 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 PLEKHA2Q9HB19 425 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 COMMD9Q9P000 198 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 ZNF257Q9Y2Q1 563 aa15.87■□□□□ 0.13
VPS28-206ENST00000526734 TRBV9A0A0B4J1U6 114 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 HPGDSO60760 199 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 PMP2P02689 132 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 ELK1P19419 428 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 GNRHRP30968 328 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 ALDH3B2P48448 385 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 C10orf55Q5SWW7 151 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 LPCAT3Q6P1A2 487 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 NECAP1Q8NC96 275 aa15.86■□□□□ 0.13
VPS28-206ENST00000526734 NAA50Q9GZZ1 169 aaKnown RBP15.86■□□□□ 0.13
VPS28-206ENST00000526734 PEF1Q9UBV8 284 aaKnown RBP15.86■□□□□ 0.13
VPS28-206ENST00000526734 DPPA5A6NC42 116 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 NPIPB5A8MRT5 1133 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 FAM25AB3EWG3 89 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 FAM25CB3EWG5 89 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 FAM25GB3EWG6 89 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 DHFRP00374 187 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 ZNF735P0CB33 412 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 APELAP0DMC3 54 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 HLA-GP17693 338 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 S100GP29377 79 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 HRH1P35367 487 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 RHOGP84095 191 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 OR4A47Q6IF82 309 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 SNX29P2Q8IUI4 249 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 OR51H1Q8NH63 302 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 GPHA2Q96T91 129 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 SLC2A9Q9NRM0 540 aa15.85■□□□□ 0.13
VPS28-206ENST00000526734 TEX22C9J3V5 150 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 GPR31O00270 319 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 CD69Q07108 199 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 TATDN3Q17R31 274 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 SSX9Q7RTT3 188 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 LYSMD2Q8IV50 215 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 CADM3Q8N126 398 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 PRR25Q96S07 402 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 BCL7BQ9BQE9 202 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 SRSF8Q9BRL6 282 aaKnown RBP15.84■□□□□ 0.13
VPS28-206ENST00000526734 HRASLSQ9HDD0 168 aa15.84■□□□□ 0.13
VPS28-206ENST00000526734 LSM4Q9Y4Z0 139 aaKnown RBP15.84■□□□□ 0.13
VPS28-206ENST00000526734 TNCP24821 2201 aa15.83■□□□□ 0.13
VPS28-206ENST00000526734 ANKRD34BA5PLL1 514 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 F2RP25116 425 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 HLA-DMAP28067 261 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 ERVK-16P61578 105 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 TSPAN5P62079 268 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 ATP5G2Q06055 141 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 KLF5Q13887 457 aaPredicted RBP15.83■□□□□ 0.12
VPS28-206ENST00000526734 THOC7Q6I9Y2 204 aaKnown RBP15.83■□□□□ 0.12
VPS28-206ENST00000526734 FXYD6Q9H0Q3 95 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 AKIP1Q9NQ31 210 aa15.83■□□□□ 0.12
VPS28-206ENST00000526734 FAM212BQ9NTI7 297 aaPredicted RBP15.83■□□□□ 0.12
VPS28-206ENST00000526734 PGLYRP1O75594 196 aaPredicted RBP15.82■□□□□ 0.12
VPS28-206ENST00000526734 LY86O95711 162 aa15.82■□□□□ 0.12
VPS28-206ENST00000526734 RLN1P04808 185 aa15.82■□□□□ 0.12
VPS28-206ENST00000526734 CRYGCP07315 174 aa15.82■□□□□ 0.12
VPS28-206ENST00000526734 IL6RP08887 468 aaPredicted RBP15.82■□□□□ 0.12
VPS28-206ENST00000526734 HIST1H1BP16401 226 aaKnown RBP15.82■□□□□ 0.12
VPS28-206ENST00000526734 EXOSC2Q13868 293 aaKnown RBP15.82■□□□□ 0.12
VPS28-206ENST00000526734 VAX1Q5SQQ9 334 aa15.82■□□□□ 0.12
VPS28-206ENST00000526734 DMBX1Q8NFW5 382 aa15.82■□□□□ 0.12
VPS28-206ENST00000526734 FYTTD1Q96QD9 318 aaKnown RBP15.82■□□□□ 0.12
VPS28-206ENST00000526734 HMX3A6NHT5 357 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 UPK2O00526 184 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 S1PR2O95136 353 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 TBPP20226 339 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 UCP3P55916 312 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 ZNF45Q02386 682 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 RPEL1Q2QD12 228 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 KLK9Q2XQG4 91 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 RAB2BQ8WUD1 216 aa15.81■□□□□ 0.12
VPS28-206ENST00000526734 DGCR14Q96DF8 476 aaKnown RBP15.81■□□□□ 0.12
VPS28-206ENST00000526734 COMMD5Q9GZQ3 224 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms