RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 SRRM5B3KS81 715 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 M0R1X1 148 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 IL3RAP26951 378 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 OPRK1P41145 380 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 SRSF6Q13247 344 aaKnown RBP9.65□□□□□ -0.86
LINC01001-201ENST00000526704 PDLIM3Q53GG5 364 aaPredicted RBP9.65□□□□□ -0.86
LINC01001-201ENST00000526704 CST9LP1Q5W188 147 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 CISD2Q8N5K1 135 aaKnown RBP9.65□□□□□ -0.86
LINC01001-201ENST00000526704 ZNF114Q8NC26 417 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 BEND2Q8NDZ0 799 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 OR4A16Q8NH70 328 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 IFI27L2Q9H2X8 130 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 MS4A5Q9H3V2 200 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 DUSP13Q9UII6 198 aa9.65□□□□□ -0.86
LINC01001-201ENST00000526704 A8MWP6 167 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 AQP7O14520 342 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 MPDU1O75352 247 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 NDUFB4O95168 129 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 CD99P14209 185 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 ZNF134P52741 427 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 LOXL3P58215 753 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 RELBQ01201 579 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 MSMPQ1L6U9 139 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 FAM78BQ5VT40 261 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 TMEM144Q7Z5S9 345 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 DEFB123Q8N688 67 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 FDCSPQ8NFU4 85 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 OR2Z1Q8NG97 314 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 OR52E5Q8NH55 327 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 GGTLC1Q9BX51 225 aa9.65□□□□□ -0.87
LINC01001-201ENST00000526704 IGHV3OR15-7A0A075B7D8 119 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 A0A1W2PPV4 95 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 F6UZH7 168 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 SOX15O60248 233 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 GFRA3O60609 400 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 YPEL1O60688 119 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 IGHV3-13P01766 116 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 C1QTNF9P0C862 333 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 NDUFAF3Q9BU61 184 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 HEYLQ9NQ87 328 aaPredicted RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 NKX2-8O15522 239 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 CCL11P51671 97 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 LCN2P80188 198 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 CR1LQ2VPA4 569 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 SPRNQ5BIV9 151 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 UTF1Q5T230 341 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 OPN3Q9H1Y3 402 aaPredicted RBP9.64□□□□□ -0.87
LINC01001-201ENST00000526704 TMEM140Q9NV12 185 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 PXMP4Q9Y6I8 212 aa9.64□□□□□ -0.87
LINC01001-201ENST00000526704 SVILO95425 2214 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 M0R296 226 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 F2RL2O00254 374 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 MGST3O14880 152 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 STAG3L2P0CL84 134 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 STAG3L3P0CL85 134 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 ERVK-16P61578 105 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 LRP11Q86VZ4 500 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 GCSAMQ8N6F7 178 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 FAM216AQ8WUB2 273 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 DDB2Q92466 427 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 CADP27708 2225 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 TNFSF13O75888 250 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 PLSCR4Q9NRQ2 329 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
LINC01001-201ENST00000526704 RAB4AP20338 218 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 MZT1Q08AG7 82 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 BHLHA15Q7RTS1 189 aaPredicted RBP9.62□□□□□ -0.87
LINC01001-201ENST00000526704 ZNRF1Q8ND25 227 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 TMEM204Q9BSN7 226 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 ZNF71Q9NQZ8 489 aaPredicted RBP9.62□□□□□ -0.87
LINC01001-201ENST00000526704 LSM4Q9Y4Z0 139 aaKnown RBP9.62□□□□□ -0.87
LINC01001-201ENST00000526704 TRGV8A0A0C4DH27 118 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 SCO2A0A1W2PP80 73 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 CXorf1O96002 111 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 CNN1P51911 297 aaKnown RBP9.62□□□□□ -0.87
LINC01001-201ENST00000526704 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 IMMP2LQ96T52 175 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 S1PR3Q99500 378 aa9.62□□□□□ -0.87
LINC01001-201ENST00000526704 A0A0U1RQK1 487 aa9.61□□□□□ -0.87
LINC01001-201ENST00000526704 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms