RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 AMTNQ6UX39 209 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 SPATA12Q7Z6I5 190 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 SLC22A24Q8N4F4 322 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 DAND5Q8N907 189 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 OR10A6Q8NH74 314 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 LMX1AQ8TE12 382 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 RAB2BQ8WUD1 216 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 PPP1R2P1Q96PQ5 205 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 CXorf21Q9HAI6 301 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 GLTPQ9NZD2 209 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 AK3Q9UIJ7 227 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 FBXO5Q9UKT4 447 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 PYCARDQ9ULZ3 195 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
CSDE1-211ENST00000525970 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
CSDE1-211ENST00000525970 CAMSAP1Q5T5Y3 1602 aa2.34□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.04
CSDE1-211ENST00000525970 CAMSAP2Q08AD1 1489 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CCDC141Q6ZP82 1450 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CFAP74Q9C0B2 1584 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 SYNGR2O43760 224 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 TTRP02766 147 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 RUNX1Q01196 453 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF117Q03924 483 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 OR10D4PQ8NGN7 298 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 DGCR14Q96DF8 476 aaKnown RBP2.33□□□□□ -2.04
CSDE1-211ENST00000525970 SFRP2Q96HF1 295 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 PKMYT1Q99640 499 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 DCSTAMPQ9H295 470 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CENPHQ9H3R5 247 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 GPR84Q9NQS5 396 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CMTM6Q9NX76 183 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 PKIGQ9Y2B9 76 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 E9PCH4 1651 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 RALGAPA2Q2PPJ7 1873 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CFTRP13569 1480 aa2.33□□□□□ -2.04
CSDE1-211ENST00000525970 CLASP1Q7Z460 1538 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 PLXNC1O60486 1568 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 HECW2Q9P2P5 1572 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 A0A1B0GW54 56 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 VPS37CA5D8V6 355 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-211ENST00000525970 OR5K4A6NMS3 321 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 OR11H12B2RN74 326 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 CDS2O95674 445 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 SOD1P00441 154 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 NEFHP12036 1026 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 SERPINB10P48595 397 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 RBM11P57052 281 aaKnown RBP2.32□□□□□ -2.04
CSDE1-211ENST00000525970 PSME3P61289 254 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 FABP9Q0Z7S8 132 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 CST6Q15828 149 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 LPCAT3Q6P1A2 487 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 OR6V1Q8N148 313 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 CNEP1R1Q8N9A8 125 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 OR11H2Q8NH07 326 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 OR4X1Q8NH49 305 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 CLDND2Q8NHS1 167 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 RPS4Y2Q8TD47 263 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 CNBD2Q96M20 576 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 HIGD2AQ9BW72 106 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 MND1Q9BWT6 205 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 ANGPT4Q9Y264 503 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 ROCK1Q13464 1354 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 RTEL1-TNFRSF6BF6WH68 1400 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 ERBINQ96RT1 1412 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 UHRF1BP1LA0JNW5 1464 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 ABCC2Q92887 1545 aa2.32□□□□□ -2.04
CSDE1-211ENST00000525970 IGHV3-15A0A0B4J1V0 119 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PSMD12O00232 456 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PLA2G10O15496 165 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 CNIH1O95406 144 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 CST2P09228 141 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PPP1R2P41236 205 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 LPAR6P43657 344 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 CAV1Q03135 178 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 TMED2Q15363 201 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 TMEM42Q69YG0 159 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PPP1R2P3Q6NXS1 205 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF322Q6U7Q0 402 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-211ENST00000525970 C20orf196Q8IYI0 205 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PACRGLQ8N7B6 248 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF676Q8N7Q3 588 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 LINC00304Q8N9R0 145 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 KLK6Q92876 244 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 C12orf43Q96C57 262 aaKnown RBP2.31□□□□□ -2.04
CSDE1-211ENST00000525970 ROPN1LQ96C74 230 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 DCUN1D1Q96GG9 259 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 MGLLQ99685 303 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 C9orf16Q9BUW7 83 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 TMEM222Q9H0R3 208 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PRELID3BQ9Y3B1 194 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 MMACHCQ9Y4U1 282 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 PIK3C2GO75747 1445 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms