RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 WISP3O95389 354 aaPredicted RBP3□□□□□ -1.93
USP47-206ENST00000525367 ZNF682O95780 498 aa3□□□□□ -1.93
USP47-206ENST00000525367 C1QBP02746 253 aa3□□□□□ -1.93
USP47-206ENST00000525367 CPMP14384 443 aa3□□□□□ -1.93
USP47-206ENST00000525367 SLC25A16P16260 332 aa3□□□□□ -1.93
USP47-206ENST00000525367 SPI1P17947 270 aa3□□□□□ -1.93
USP47-206ENST00000525367 S100GP29377 79 aa3□□□□□ -1.93
USP47-206ENST00000525367 RAB13P51153 203 aa3□□□□□ -1.93
USP47-206ENST00000525367 TSPEAR-AS2P59090 65 aa3□□□□□ -1.93
USP47-206ENST00000525367 LCN6P62502 163 aa3□□□□□ -1.93
USP47-206ENST00000525367 RHOBP62745 196 aa3□□□□□ -1.93
USP47-206ENST00000525367 HBA1P69905 142 aa3□□□□□ -1.93
USP47-206ENST00000525367 BIKQ13323 160 aa3□□□□□ -1.93
USP47-206ENST00000525367 LGALSLQ3ZCW2 172 aaPredicted RBP3□□□□□ -1.93
USP47-206ENST00000525367 C16orf47Q6ZP98 133 aaPredicted RBP3□□□□□ -1.93
USP47-206ENST00000525367 ADM2Q7Z4H4 148 aa3□□□□□ -1.93
USP47-206ENST00000525367 ZNF695Q8IW36 515 aa3□□□□□ -1.93
USP47-206ENST00000525367 Q8N9L7 120 aa3□□□□□ -1.93
USP47-206ENST00000525367 OR10K1Q8NGX5 313 aa3□□□□□ -1.93
USP47-206ENST00000525367 FNDC9Q8TBE3 224 aa3□□□□□ -1.93
USP47-206ENST00000525367 C20orf27Q9GZN8 174 aa3□□□□□ -1.93
USP47-206ENST00000525367 TMEM222Q9H0R3 208 aa3□□□□□ -1.93
USP47-206ENST00000525367 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
USP47-206ENST00000525367 SLC35A3Q9Y2D2 325 aa3□□□□□ -1.93
USP47-206ENST00000525367 S4R3C0 116 aa3□□□□□ -1.93
USP47-206ENST00000525367 BAZ1BQ9UIG0 1483 aaKnown RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 IGLV3-12A0A075B6K2 115 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 TRAV9-1A0A075B6T8 112 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 IGKV1OR2-108A0A075B7D4 117 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 A8MUU9 505 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 LECT2O14960 151 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 ZNF324O75467 553 aaPredicted RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 NDUFB2O95178 105 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 NBEAP1P0C6P0 100 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 INAFM2P0DMQ5 153 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 SMIM10L2AP0DMW4 78 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 SMIM10L2BP0DMW5 78 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 GABRA2P47869 451 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 NCALDP61601 193 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 RPL30P62888 115 aaKnown RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 GNG5P63218 68 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 RASL11AQ6T310 242 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 ERMAPQ96PL5 475 aaPredicted RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 AIF1LQ9BQI0 150 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 ACER3Q9NUN7 267 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 TVP23BQ9NYZ1 205 aa2.99□□□□□ -1.93
USP47-206ENST00000525367 KLK5Q9Y337 293 aaPredicted RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 BAZ2AQ9UIF9 1905 aaKnown RBP2.99□□□□□ -1.93
USP47-206ENST00000525367 DOCK8Q8NF50 2099 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 GRIFINA4D1Z8 144 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 MAP1LC3B2A6NCE7 125 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 H3BQ85 93 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 MFSD11O43934 449 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 IGHV3-53P01767 116 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 CRYBB3P26998 211 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 S100A7P31151 101 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 RPL27AP46776 148 aaKnown RBP2.98□□□□□ -1.93
USP47-206ENST00000525367 SERPINB10P48595 397 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 TAS2R20P59543 309 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 TMEM69Q5SWH9 247 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 DCUN1D2Q6PH85 259 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 FAM24BQ8N5W8 94 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 PACRGLQ8N7B6 248 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 ZNF283Q8N7M2 679 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 TMEM35BQ8NCS4 154 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 RPS4Y2Q8TD47 263 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 SKA2Q8WVK7 121 aaPredicted RBP2.98□□□□□ -1.93
USP47-206ENST00000525367 ZNF285Q96NJ3 590 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 SPIN2AQ99865 258 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 SPIN2BQ9BPZ2 258 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 MAP1LC3BQ9GZQ8 125 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 C11orf68Q9H3H3 251 aaKnown RBP2.98□□□□□ -1.93
USP47-206ENST00000525367 TAS2R7Q9NYW3 318 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 HSPB11Q9Y547 144 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 YTHDC2Q9H6S0 1430 aaKnown RBP2.98□□□□□ -1.93
USP47-206ENST00000525367 ROBO3Q96MS0 1386 aa2.98□□□□□ -1.93
USP47-206ENST00000525367 ANKRD12Q6UB98 2062 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 LOXHD1Q8IVV2 1947 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 COL16A1Q07092 1604 aaPredicted RBP2.97□□□□□ -1.93
USP47-206ENST00000525367 PLA2R1Q13018 1463 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 PRRC2AP48634 2157 aaKnown RBP2.97□□□□□ -1.93
USP47-206ENST00000525367 KMT2EQ8IZD2 1858 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 A0A087WUU8 490 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 IGSF23A1L1A6 192 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 DPRXA6NFQ7 191 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 I3L521 148 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 ORC5O43913 435 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 IFNA7P01567 189 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 LGALS1P09382 135 aaKnown RBP2.97□□□□□ -1.93
USP47-206ENST00000525367 SMIM17P0DL12 118 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 CSN1S1P47710 185 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 RWDD2BP57060 319 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 SCGB2B2Q4G0G5 96 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 Q6Q795 121 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 ZNF322Q6U7Q0 402 aaPredicted RBP2.97□□□□□ -1.93
USP47-206ENST00000525367 GRPEL2Q8TAA5 225 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 SLC25A40Q8TBP6 338 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 SLC7A6Q92536 515 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms