RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 THBS3P49746 956 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 TAF6P49848 677 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 HERVK_113P61574 105 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 GRB2P62993 217 aaKnown RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 SELENOWP63302 87 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 RELAQ04206 551 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 LY6DQ14210 128 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 RHEBQ15382 184 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 TAF9Q16594 264 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 ZNF239Q16600 458 aaKnown RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 PRR30Q53SZ7 412 aaPredicted RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 TCEAL5Q5H9L2 206 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 UBE2NLQ5JXB2 153 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 C12orf45Q8N5I9 185 aaPredicted RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 DRAM1Q8N682 238 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 ZNF433Q8N7K0 673 aaPredicted RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 TSTD1Q8NFU3 115 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 PPP3R2Q96LZ3 170 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 CDC42EP4Q9H3Q1 356 aaKnown RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 ZNF696Q9H7X3 374 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 SLC25A22Q9H936 323 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 RPS6KB2Q9UBS0 482 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 KLK13Q9UKR3 277 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 NEUROG3Q9Y4Z2 214 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 MGAMO43451 1857 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 TMED7-TICAM2A0A0A6YYA0 188 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 A0A0J9YY10 115 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 LOC102725191A0A1B0GVB3 256 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 A0A1B0GX78 115 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 RIIAD1A6NNX1 92 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 H3BSA7 217 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 M0R1X1 148 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SLC37A4O43826 429 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SRSF10O75494 262 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 BGLAPP02818 100 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SOD3P08294 240 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ZSCAN5DPP0CG00 497 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PSG2P11465 335 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TDGF1P13385 188 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 EVI2AP22794 236 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 IL3RAP26951 378 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 OR10J1P30954 320 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ATP5G3P48201 142 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 EVX1P49640 407 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PSMB3P49720 205 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TDGF1P3P51864 188 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 MAXP61244 160 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 CRADDP78560 199 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 FABP9Q0Z7S8 132 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ENDOGQ14249 297 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 NEDD8Q15843 81 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SSX1Q16384 188 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TIMM50Q3ZCQ8 353 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SCGB2B2Q4G0G5 96 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 NHLRC3Q5JS37 347 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 CASC10Q5T4H9 136 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ADAMTSL4-AS1Q5T5F5 129 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PRSS54Q6PEW0 395 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ZNF773Q6PK81 442 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TMUB2Q71RG4 321 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 DEFB128Q7Z7B8 93 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 LINC00596Q86U02 117 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PRIMA1Q86XR5 153 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 NRACQ8N912 160 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 NUP35Q8NFH5 326 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 OR13C8Q8NGS7 320 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 OR2T27Q8NH04 317 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 OR52P1PQ8NH57 321 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TWIST2Q8WVJ9 160 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 SLC7A6Q92536 515 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ARL11Q969Q4 196 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ADAT3Q96EY9 351 aaPredicted RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 OR5M11Q96RB7 305 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 ATOH8Q96SQ7 321 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 LXNQ9BS40 222 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PDCD10Q9BUL8 212 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 LINC00470Q9BZP3 86 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 PARP12Q9H0J9 701 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 IFI27L2Q9H2X8 130 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 Q9H3A6 140 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TMEM38BQ9NVV0 291 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 DHCR7Q9UBM7 475 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 TBX21Q9UL17 535 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 RBBP6Q7Z6E9 1792 aaKnown RBP3.35□□□□□ -1.87
CD44-213ENST00000525209 ECM29Q5VYK3 1845 aa3.35□□□□□ -1.87
CD44-213ENST00000525209 TRBV19A0A075B6N1 114 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 DUXBA0A1W2PPF3 345 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 DNASE2O00115 360 aaPredicted RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 PIRO00625 290 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms